RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GLB1LQ6UWU2 654 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 NUDT18Q6ZVK8 323 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 TRAPPC3O43617 180 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 PFKFB3Q16875 520 aaPredicted RBP14.9□□□□□ -0.02
SIX4-201ENST00000216513 GPR161Q8N6U8 529 aaKnown RBP14.9□□□□□ -0.02
SIX4-201ENST00000216513 SH3GLB2Q9NR46 395 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 MRPS25P82663 173 aaKnown RBP14.9□□□□□ -0.02
SIX4-201ENST00000216513 ACER1Q8TDN7 264 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 SH3TC2Q8TF17 1288 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 MRPL4Q9BYD3 311 aaKnown RBP14.9□□□□□ -0.02
SIX4-201ENST00000216513 NYAP2Q9P242 653 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 EVI5O60447 810 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 LDHAP00338 332 aaKnown RBP14.9□□□□□ -0.02
SIX4-201ENST00000216513 SP3Q02447 781 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 EMILIN3Q9NT22 766 aa14.9□□□□□ -0.02
SIX4-201ENST00000216513 NSUN7Q8NE18 718 aaKnown RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 PRIMPOLQ96LW4 560 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 SUDS3Q9H7L9 328 aaPredicted RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 PCDHB6Q9Y5E3 794 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 ALDH7A1P49419 539 aaKnown RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 BPIFB4P59827 614 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 HDLBPQ00341 1268 aaKnown RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 CPLX4Q7Z7G2 160 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 FBXO16Q8IX29 292 aaPredicted RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 ANAPC5Q9UJX4 755 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 TMEM143Q96AN5 459 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 CCDC68Q9H2F9 335 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 IGFLR1Q9H665 355 aa14.89□□□□□ -0.03
SIX4-201ENST00000216513 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
SIX4-201ENST00000216513 ABCC12Q96J65 1359 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ZMYND10O75800 440 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 PRPSAP1Q14558 356 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 KRBA2Q6ZNG9 492 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 DDX53Q86TM3 631 aaKnown RBP14.88□□□□□ -0.03
SIX4-201ENST00000216513 RFX6Q8HWS3 928 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 STK17AQ9UEE5 414 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 AK9Q5TCS8 1911 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 STAG3L1P0CL83 205 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ITGA4P13612 1032 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 C3orf67Q6ZVT6 689 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ZDHHC15Q96MV8 337 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 PCDHA7Q9UN72 937 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 GRIK1P39086 918 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 NT5C2P49902 561 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 CDO1Q16878 200 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 H7C0C1 242 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 SAT1P21673 171 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ATP5OP48047 213 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ZNF699Q32M78 642 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 CCDC26Q8TAB7 109 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 MROH8Q9H579 483 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ADCY3O60266 1144 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 LAMC2Q13753 1193 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 MOB2Q70IA6 237 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 CCDC105Q8IYK2 499 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 SHCBP1Q8NEM2 672 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
SIX4-201ENST00000216513 CUEDC2Q9H467 287 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 CALCOCO1Q9P1Z2 691 aa14.88□□□□□ -0.03
SIX4-201ENST00000216513 ITSN1Q15811 1721 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 GPR75-ASB3A0A0A6YYF3 556 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 ADORA2BP29275 332 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 MXI1P50539 228 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 TXNRD3Q86VQ6 643 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 SIRT2Q8IXJ6 389 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 MAGEF1Q9HAY2 307 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 E9PMD0 336 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 RINT1Q6NUQ1 792 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 EXOC4Q96A65 974 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 ACAP3Q96P50 834 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 POTECB2RU33 542 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 HAUS1Q96CS2 278 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 HTATIP2Q9BUP3 242 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 ENC1O14682 589 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 PFDN6O15212 129 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 C6orf163Q5TEZ5 329 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 GAS2L3Q86XJ1 694 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 LRRC71Q8N4P6 559 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 FAM20AQ96MK3 541 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 PRG3Q9Y2Y8 225 aaPredicted RBP14.87□□□□□ -0.03
SIX4-201ENST00000216513 ORC4O43929 436 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 BUB1BO60566 1050 aaPredicted RBP14.87□□□□□ -0.03
SIX4-201ENST00000216513 AFPP02771 609 aaKnown RBP14.87□□□□□ -0.03
SIX4-201ENST00000216513 SLC10A5Q5PT55 438 aa14.87□□□□□ -0.03
SIX4-201ENST00000216513 FAM217BQ9NTX9 383 aaPredicted RBP14.87□□□□□ -0.03
SIX4-201ENST00000216513 PSMD6Q15008 389 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 CEP55Q53EZ4 464 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms