RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Adcy2Q80TL1 1090 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Dnajc6Q80TZ3 938 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Strip1Q8C079 837 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gbp5Q8CFB4 590 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ube2sQ921J4 223 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Coro7Q9D2V7 922 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tbx18Q9EPZ6 613 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mroh2aD3Z750 1679 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Vmn2r78K7N6U5 853 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Xbp1O35426 267 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Fam89aQ14BJ1 175 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Qrich1Q3UA37 777 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 OtulinQ3UCV8 352 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Olfr121Q5CZY0 321 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Map10Q8BJS7 891 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Plcg2Q8CIH5 1265 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Arhgef7Q9ES28 862 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Myoz2Q9JJW5 264 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Eif2ak4Q9QZ05 1648 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ifi207E9Q3L4 978 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Lilrb4Q64281 335 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ppp1r12bQ8BG95 976 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Snx14Q8BHY8 964 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ccdc15Q8C9M2 810 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Clasp1Q80TV8 1535 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pcdh10E9PXQ7 1057 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Hnrnph2P70333 449 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Usp13Q5BKP2 858 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Atg9aQ68FE2 551 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tmem59lQ7TNI2 337 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pnpt1Q8K1R3 783 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 4921530L21RikQ9CQ47 274 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 CactinQ9CS00 772 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tmem47Q9JJG6 181 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Apol11aE9PZG0 334 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tph1P17532 447 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gna14P30677 355 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 GalcP54818 684 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Slc12a1P55014 1095 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 HdxQ14B70 692 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Arhgef16Q3U5C8 713 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ankzf1Q80UU1 748 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Myo1hQ9D6A1 958 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cpb2Q9JHH6 422 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 1700017N19RikA0A087WPJ1 469 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gm28360A0A087WR25 190 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ccng2O08918 344 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Kdm7aQ3UWM4 940 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cage1Q5IR70 849 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Prl2c1Q5SVL9 228 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Map3k7Q62073 579 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mrps22Q9CXW2 359 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ascc1Q9D8Z1 356 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Nid2O88322 1403 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cep170Q6A065 1588 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Znf507Q6ZPY5 941 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Slc4a7Q8BTY2 1034 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Psmd9Q9CR00 222 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 TarsQ9D0R2 722 aaKnown RBP12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 TbcbQ9D1E6 244 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Trip6Q9Z1Y4 480 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Spag17Q5S003 2320 aa12.54□□□□□ -0.4
Ndc1-204ENSMUST00000139560 TprnA2AI08 749 aaKnown RBP12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Oip5A2AQ14 241 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ttc38A3KMP2 465 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Prss40A6H6T1 365 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 MyocO70624 490 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mucl2P02815 138 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Rapgef5Q8C0Q9 814 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Scrn1Q9CZC8 414 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Bcs1lQ9CZP5 418 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pgm1Q9D0F9 562 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ecel1Q9JMI0 775 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Krt17Q9QWL7 433 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Uts2Q9QZQ3 123 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cog1Q9Z160 980 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Uggt1Q6P5E4 1551 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Simc1E9Q6E9 1354 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ice1E9Q286 2241 aaKnown RBP12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gm15262A0A140LIQ5 728 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Rexo5D3YW29 759 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Syt2P46097 422 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Xxylt1Q3U4G3 392 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tmprss11aQ3UQ41 389 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tspyl5Q69ZB3 406 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Olfr832Q7TRG9 312 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Nacc1Q7TSZ8 514 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 CcnyQ8BGU5 341 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Chmp2bQ8BJF9 213 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Dact1Q8R4A3 778 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Drap1Q9D6N5 205 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pfkfb3A7UAK5 555 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Q32P12 615 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Krt31Q61765 416 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tdpoz4Q6YCH2 370 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Iqcb1Q8BP00 598 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gpr108Q91WD0 569 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Nsmce3Q9CPR8 279 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Smyd3Q9CWR2 428 aa12.53□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Atp6v1e2Q9D593 226 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms