RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Upf3aQ3ULJ3 422 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Kiaa1841Q68FF0 718 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Ahcyl2Q68FL4 613 aaKnown RBP9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Tmem164Q6PHN7 296 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Rps9Q6ZWN5 194 aaKnown RBP9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Zfyve1Q810J8 777 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Znf473Q8BI67 892 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Edem2Q8BJT9 577 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Zfp120Q8BZW4 436 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Fam78aQ8C552 283 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Noxred1Q9D3S5 366 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Eif4e3Q9DBB5 207 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Clstn1Q9EPL2 979 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Tlr6Q9EPW9 795 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 CtsfQ9R013 462 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 JcadQ5DTX6 1320 aa9.3□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Cyp4a29A0A087WPC3 509 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Gm13090A2A899 111 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Oip5A2AQ14 241 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Upf2A2AT37 1269 aaKnown RBP9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Pex10B1AUE5 324 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Phactr2B1AVP0 632 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Klhl33G3UW92 533 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Eif5bQ05D44 1216 aaKnown RBP9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Cwc27Q3TKY6 469 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Arhgef16Q3U5C8 713 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Ephx3Q3V1F8 367 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Foxl1Q64731 336 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 ManeaQ6NXH2 462 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Adamtsl4Q80T21 1036 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Atg4cQ811C2 458 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Nol12Q8BG17 217 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Golim4Q8BXA1 655 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Yars2Q8BYL4 472 aaKnown RBP9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Gpr61Q8C010 449 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Vps52Q8C754 723 aaKnown RBP9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Atp2a1Q8R429 994 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Olfr1352Q8VGX5 309 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 FcrlaQ920A9 352 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Spg21Q9CQC8 308 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Spatc1lQ9D9W0 342 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Tmod3Q9JHJ0 352 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Dnajb8Q9QYI7 227 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 ChmlQ9QZD5 621 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Ccdc171E9Q1U1 1324 aa9.29□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Cep192E9Q4Y4 2514 aaKnown RBP9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Smim10l2aA0A0B4J1F8 78 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Skint8A7XV07 398 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Vwa3bJ9JI28 736 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Kpna6O35345 536 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Slc4a4O88343 1079 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 FanccP50652 591 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Kcna2P63141 499 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Lrrfip1Q3UZ39 729 aaKnown RBP9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 SynaQ5G5D5 617 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Smarca1Q6PGB8 1046 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Fam49aQ8BHZ0 323 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Def6Q8C2K1 630 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Adamts2Q8C9W3 1213 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Ces1dQ8VCT4 565 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 1700069L16RikQ9D9H5 109 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Plod3Q9R0E1 741 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Stk39Q9Z1W9 556 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Myh7Q91Z83 1935 aa9.28□□□□□ -0.92
Scn8a-202ENSMUST00000096198 TrrapQ80YV3 2565 aaKnown RBP9.27□□□□□ -0.92
Scn8a-202ENSMUST00000096198 Gm7086A0A1W2P766 342 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Ankrd16A2AS55 361 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Adamtsl5D3Z689 485 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Trim30bE9PVL6 203 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Zfr2E9Q5M4 874 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Vti1aO89116 217 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Slc10a3P21129 473 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Alppl2P24823 529 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Cd86P42082 309 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Dbx1P52950 335 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Rftn1Q6A0D4 554 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Prickle2Q80Y24 845 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Nup133Q8R0G9 1155 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Mob2Q8VI63 235 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Usp26Q99MX1 835 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Rgs3Q9DC04 966 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Pold3Q9EQ28 462 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 PorcnQ9JJJ7 461 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Nr1h3Q9Z0Y9 445 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Ulk4Q3V129 1303 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Chd3B1AR17 2055 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Setd2E9Q5F9 2537 aa9.27□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Cyp27b1O35084 507 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Aoc3O70423 765 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Cyp8b1O88962 500 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Mcpt2P15119 244 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Lamp2P17047 415 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Hoxd12P23812 268 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Folr1P35846 255 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Taf1bP97358 586 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 SPINDOCQ05AH6 381 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Siah1bQ06985 282 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 ZbbxQ0P5X5 716 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Antxr2Q6DFX2 487 aa9.26□□□□□ -0.93
Scn8a-202ENSMUST00000096198 Adgrg6Q6F3F9 1165 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms