RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CASP5P51878 434 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 NYAP1Q6ZVC0 841 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 FASTKD5Q7L8L6 764 aaKnown RBP19.1■□□□□ 0.65
PHGDH-208ENST00000641023 OPTNQ96CV9 577 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 DBR1Q9UK59 544 aaKnown RBP19.1■□□□□ 0.65
PHGDH-208ENST00000641023 AGTPBP1Q9UPW5 1226 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 TRAF3IP3Q9Y228 551 aa19.1■□□□□ 0.65
PHGDH-208ENST00000641023 SCN4AP35499 1836 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 SFI1A8K8P3 1242 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 KIF2AO00139 706 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 PDXKO00764 312 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 PSMC5P62195 406 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ADAM9Q13443 819 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 BMT2Q1RMZ1 405 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ZNF746Q6NUN9 644 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 C4orf19Q8IY42 314 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ERGIC2Q96RQ1 377 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ASCC2Q9H1I8 757 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ABHD10Q9NUJ1 306 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 CETN3O15182 167 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 CALUO43852 315 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 TRIM21P19474 475 aaKnown RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 KRT9P35527 623 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 ZNF131P52739 623 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 CCDC40Q4G0X9 1142 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 STXBP4Q6ZWJ1 553 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 IQCDQ96DY2 449 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 CLEC11AQ9Y240 323 aa19.09■□□□□ 0.65
PHGDH-208ENST00000641023 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
PHGDH-208ENST00000641023 EIF3DO15371 548 aaKnown RBP eCLIP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 PRPF6O94906 941 aaKnown RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 MYBP10242 640 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 YWHABP31946 246 aaKnown RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 HERVK_113P62684 666 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 SYCP1Q15431 976 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 STXBP2Q15833 593 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 PADI6Q6TGC4 694 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 NCAPG2Q86XI2 1143 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 SMAP1Q8IYB5 467 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 PCMTD1Q96MG8 357 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 CCDC43Q96MW1 224 aaKnown RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 SENP7Q9BQF6 1050 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 MOV10L1Q9BXT6 1211 aaKnown RBP19.08■□□□□ 0.64
PHGDH-208ENST00000641023 POLD4Q9HCU8 107 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 PCDHA10Q9Y5I2 948 aa19.08■□□□□ 0.64
PHGDH-208ENST00000641023 TTC26A0AVF1 554 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 RGS20O76081 388 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 CCNE2O96020 404 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 TUBB4AP04350 444 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 RARRES1P49788 294 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 MARSP56192 900 aaKnown RBP19.07■□□□□ 0.64
PHGDH-208ENST00000641023 TSR1Q2NL82 804 aaKnown RBP19.07■□□□□ 0.64
PHGDH-208ENST00000641023 TMTC1Q8IUR5 882 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 FAM178BQ8IXR5 827 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 TYW1Q9NV66 732 aaKnown RBP19.07■□□□□ 0.64
PHGDH-208ENST00000641023 CAPN11Q9UMQ6 739 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 LOC285556D6RIA3 1793 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 LOXHD1Q8IVV2 1947 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 KCNA2P16389 499 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 OSBPP22059 807 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 NR2F2P24468 414 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 ODR4Q5SWX8 454 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 ZC3H3Q8IXZ2 948 aaKnown RBP19.07■□□□□ 0.64
PHGDH-208ENST00000641023 OR8K1Q8NGG5 319 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 PPP2R2CQ9Y2T4 447 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 PAXBP1Q9Y5B6 917 aa19.07■□□□□ 0.64
PHGDH-208ENST00000641023 NFASCO94856 1347 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 GOLGA6L9A6NEM1 432 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 UNCXA6NJT0 531 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
PHGDH-208ENST00000641023 DKC1O60832 514 aaKnown RBP eCLIP19.06■□□□□ 0.641e-16■■■■■ 39.7
PHGDH-208ENST00000641023 EIF3JO75822 258 aaKnown RBP19.06■□□□□ 0.64
PHGDH-208ENST00000641023 SLC25A27O95847 323 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 FECHP22830 423 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 RPL13P26373 211 aaKnown RBP19.06■□□□□ 0.64
PHGDH-208ENST00000641023 FIGNQ5HY92 759 aa19.06■□□□□ 0.64
PHGDH-208ENST00000641023 LARSQ9P2J5 1176 aaKnown RBP19.06■□□□□ 0.64
PHGDH-208ENST00000641023 SPATA31C2B4DYI2 1134 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 RNF225M0QZC1 329 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-208ENST00000641023 ZNF720Q7Z2F6 126 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 SLC10A4Q96EP9 437 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 JPH1Q9HDC5 661 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-208ENST00000641023 PCDHB13Q9Y5F0 798 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 SOWAHDA6NJG2 315 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 PEX10O60683 326 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 HIP1RO75146 1068 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 HOXD13P35453 343 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 COPB2P35606 906 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 SNAPC2Q13487 334 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 CYP26C1Q6V0L0 522 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-208ENST00000641023 TIPINQ9BVW5 301 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 BCAS3Q9H6U6 928 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 ANKEF1Q9NU02 776 aa19.05■□□□□ 0.64
PHGDH-208ENST00000641023 SLC9A2Q9UBY0 812 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms