RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 MICAL3Q7RTP6 2002 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 TBCKQ8TEA7 893 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 ZBTB10Q96DT7 871 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 TPCN1Q9ULQ1 816 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 PCDHA10Q9Y5I2 948 aa28.56■■■□□ 2.16
VEGFA-230ENST00000640482 COL1A2P08123 1366 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 STK36Q9NRP7 1315 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 EPOPA6NHQ4 379 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 PSAPP07602 524 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 POU3F3P20264 500 aaPredicted RBP28.55■■■□□ 2.16
VEGFA-230ENST00000640482 LPIN1Q14693 890 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 FBXO47Q5MNV8 452 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 CKAP2LQ8IYA6 745 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 TOP1MTQ969P6 601 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 AIFM3Q96NN9 605 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 CHD7Q9P2D1 2997 aa28.55■■■□□ 2.16
VEGFA-230ENST00000640482 SMIM35A0A1B0GVV1 85 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-230ENST00000640482 LINC01553A4QN01 128 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 XBP1P17861 261 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 HTRA4P83105 476 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-230ENST00000640482 ZNF484Q5JVG2 852 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 MTHFD1LQ6UB35 978 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 TSHZ1Q6ZSZ6 1077 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 MICALL1Q8N3F8 863 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 NME8Q8N427 588 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 IL17RAQ96F46 866 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 TGS1Q96RS0 853 aaKnown RBP28.54■■■□□ 2.16
VEGFA-230ENST00000640482 SAMM50Q9Y512 469 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 TRPV2Q9Y5S1 764 aa28.54■■■□□ 2.16
VEGFA-230ENST00000640482 WDR64B1ANS9 1081 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 MSH4O15457 936 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 EDIL3O43854 480 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 AK2P54819 239 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 RIT2Q99578 217 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 MAFBQ9Y5Q3 323 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-230ENST00000640482 MTCH2Q9Y6C9 303 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 SQORQ9Y6N5 450 aa28.53■■■□□ 2.16
VEGFA-230ENST00000640482 M0R2N6 131 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 UPP2O95045 317 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 KLRC1P26715 233 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 ERVK-21P61565 698 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 SPRED2Q7Z698 418 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 BBXQ8WY36 941 aaPredicted RBP28.52■■■□□ 2.16
VEGFA-230ENST00000640482 YME1L1Q96TA2 773 aa28.52■■■□□ 2.16
VEGFA-230ENST00000640482 TSPYL2Q9H2G4 693 aaPredicted RBP28.52■■■□□ 2.16
VEGFA-230ENST00000640482 GAS7O60861 476 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 TMEM62Q0P6H9 643 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 GRB10Q13322 594 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 NONOQ15233 471 aaKnown RBP eCLIP28.51■■■□□ 2.153e-6■■■□□ 16.3
VEGFA-230ENST00000640482 NPY5RQ15761 445 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 Q4G0T1 1027 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 KRT25Q7Z3Z0 450 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 COL25A1Q9BXS0 654 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-230ENST00000640482 PRDM6Q9NQX0 595 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 THEGQ9P2T0 379 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 GABBR1Q9UBS5 961 aa28.51■■■□□ 2.15
VEGFA-230ENST00000640482 PRUNE2Q8WUY3 3088 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 MYO9BQ13459 2157 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 CYP3A7-CYP3A51PA0A087WV96 503 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 ATP4AP20648 1035 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 CYP3A7P24462 503 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 LRCH2Q5VUJ6 765 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 SP7Q8TDD2 431 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-230ENST00000640482 SLC5A5Q92911 643 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 FAM167AQ96KS9 214 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 PHF20Q9BVI0 1012 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 TEKT3Q9BXF9 490 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 CELF4Q9BZC1 486 aaKnown RBP28.5■■■□□ 2.15
VEGFA-230ENST00000640482 DISC1Q9NRI5 854 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 MTUS1Q9ULD2 1270 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 KCNJ14Q9UNX9 436 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 SIP14410 1827 aa28.5■■■□□ 2.15
VEGFA-230ENST00000640482 IGSF9BQ9UPX0 1349 aa28.49■■■□□ 2.15
VEGFA-230ENST00000640482 SFNP31947 248 aa28.49■■■□□ 2.15
VEGFA-230ENST00000640482 MOXD1Q6UVY6 613 aa28.49■■■□□ 2.15
VEGFA-230ENST00000640482 WASF1Q92558 559 aa28.49■■■□□ 2.15
VEGFA-230ENST00000640482 CEP131Q9UPN4 1083 aa28.49■■■□□ 2.15
VEGFA-230ENST00000640482 KDM3AQ9Y4C1 1321 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 A0A0C4DFX4 3053 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 CD52P31358 61 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 JAK3P52333 1124 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 GDPD5Q8WTR4 605 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 ATXN2LQ8WWM7 1075 aaKnown RBP28.48■■■□□ 2.15
VEGFA-230ENST00000640482 SYMPKQ92797 1274 aaKnown RBP28.48■■■□□ 2.15
VEGFA-230ENST00000640482 FTHL17Q9BXU8 183 aa28.48■■■□□ 2.15
VEGFA-230ENST00000640482 AGO3Q9H9G7 860 aaKnown RBP28.48■■■□□ 2.15
VEGFA-230ENST00000640482 CCDC194A0A1B0GVG4 234 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 ZBTB42B2RXF5 422 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 ENPP3O14638 875 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 CHMP2AO43633 222 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 TDP2O95551 362 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 PAK2Q13177 524 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 TJAP1Q5JTD0 557 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 TRMT1LQ7Z2T5 733 aaKnown RBP28.47■■■□□ 2.15
VEGFA-230ENST00000640482 SAMD11Q96NU1 681 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 SUGCTQ9HAC7 445 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 LMCD1Q9NZU5 365 aa28.47■■■□□ 2.15
VEGFA-230ENST00000640482 ORC3Q9UBD5 711 aaPredicted RBP28.47■■■□□ 2.15
VEGFA-230ENST00000640482 LPXNO60711 386 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms