RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 BCAS3Q9H6U6 928 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GOLGA6AQ9NYA3 693 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GUCA1BQ9UMX6 200 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 NDUFAB1O14561 156 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 SPAG1Q07617 926 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 BZW1Q7L1Q6 419 aaKnown RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 SPATS2Q86XZ4 545 aaKnown RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 SLC35F6Q8N357 371 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 ACER1Q8TDN7 264 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
SPIN3-236ENST00000640131 FAM207AQ9NSI2 230 aaPredicted RBP13.56□□□□□ -0.24
SPIN3-236ENST00000640131 ARFGEF1Q9Y6D6 1849 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 KIF4AO95239 1232 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 PLCB4Q15147 1175 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
SPIN3-236ENST00000640131 TPX2Q9ULW0 747 aaKnown RBP13.55□□□□□ -0.24
SPIN3-236ENST00000640131 LGALS16A8MUM7 142 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 ENC1O14682 589 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 CCNE1P24864 410 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 CYB5D1Q6P9G0 228 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 C7orf25Q9BPX7 421 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
SPIN3-236ENST00000640131 PLEKP08567 350 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 RXRBP28702 533 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 APBA1Q02410 837 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 RASA3Q14644 834 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 RAD54LQ92698 747 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 PPP1R1BQ9UD71 204 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 EPHB6O15197 1021 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 SCNN1BP51168 640 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 AMPD3Q01432 767 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 LRRC23Q53EV4 343 aaPredicted RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
SPIN3-236ENST00000640131 PAPOLBQ9NRJ5 636 aaKnown RBP13.54□□□□□ -0.24
SPIN3-236ENST00000640131 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CHMP2AO43633 222 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 MAGEA10P43363 369 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CNNM4Q6P4Q7 775 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 KIF5CO60282 957 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 NT5C2P49902 561 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 PSMC6P62333 389 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 DGKZQ13574 1117 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 MMRN2Q9H8L6 949 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 MEIS2O14770 477 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CFBP00751 764 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ACBD5Q5T8D3 534 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 KRT26Q7Z3Y9 468 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 SMCR8Q8TEV9 937 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 GLIS2Q9BZE0 524 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-236ENST00000640131 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
SPIN3-236ENST00000640131 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms