RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 BTBD8Q5XKL5 378 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 GLYCTKQ8IVS8 523 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 IFNL3Q8IZI9 196 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 IER2Q9BTL4 223 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 TMEM117Q9H0C3 514 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 TUT1Q9H6E5 874 aaKnown RBP4.98□□□□□ -1.61
GABRA1-220ENST00000638159 ZFP14Q9HCL3 533 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 MAP3K20Q9NYL2 800 aaKnown RBP4.98□□□□□ -1.61
GABRA1-220ENST00000638159 TRPV2Q9Y5S1 764 aa4.98□□□□□ -1.61
GABRA1-220ENST00000638159 FRMPD2Q68DX3 1309 aaPredicted RBP4.98□□□□□ -1.61
GABRA1-220ENST00000638159 POTEB3A0JP26 581 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 RPP40O75818 363 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 MBD4O95243 580 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SRFP11831 508 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 OR1G1P47890 313 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 RASGRF1Q13972 1273 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 MLF2Q15773 248 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 PDXDC1Q6P996 788 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 POTEBQ6S5H4 581 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 VPS52Q8N1B4 723 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SLC7A3Q8WY07 619 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 RSPH1Q8WYR4 309 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TSR2Q969E8 191 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 HVCN1Q96D96 273 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TRMT61BQ9BVS5 477 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ABCG4Q9H172 646 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ADAM7Q9H2U9 754 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TUBE1Q9UJT0 475 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 PRG3Q9Y2Y8 225 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TMX2Q9Y320 296 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 FLT1P17948 1338 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 MYH15Q9Y2K3 1946 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CSF1RP07333 972 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 LPCAT2Q7L5N7 544 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ITPRIPQ8IWB1 547 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 PLEKHM2Q8IWE5 1019 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TRMT2AQ8IZ69 625 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 MRPS27Q92552 414 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ZNF512Q96ME7 567 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ADPGKQ9BRR6 497 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 GCOM2Q9BZD3 368 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 FBXO28Q9NVF7 368 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 UBR3Q6ZT12 1888 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 KANSL1LA0AUZ9 987 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 LCHNA4D1U4 455 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 GOLIM4O00461 696 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 OPLAHO14841 1288 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CAVIN2O95810 425 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SFTPCP11686 197 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 COPB1P53618 953 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 INHBCP55103 352 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 DAB2P98082 770 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 EXOSC9Q06265 439 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ADAM15Q13444 863 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ARID5BQ14865 1188 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SLC45A4Q5BKX6 768 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CYP26C1Q6V0L0 522 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CTCFLQ8NI51 663 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SUCLG2Q96I99 432 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ARRDC1-AS1Q9H2J1 176 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SMARCAD1Q9H4L7 1026 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 LMAN1LQ9HAT1 526 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 PCDHB11Q9Y5F2 797 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ACACAQ13085 2346 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SP9P0CG40 484 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 IFNAR2P48551 515 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 TCF15Q12870 199 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 C4orf17Q53FE4 359 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CPLX2Q6PUV4 134 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 PDZD4Q76G19 769 aaPredicted RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 SNX19Q92543 992 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 EHD4Q9H223 541 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 CDHR5Q9HBB8 845 aa4.97□□□□□ -1.61
GABRA1-220ENST00000638159 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.97□□□□□ -1.61
GABRA1-220ENST00000638159 ARFGEF2Q9Y6D5 1785 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 C4orf47A7E2U8 309 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 PEX10O60683 326 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 CIAO1O76071 339 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 CKBP12277 381 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 RBMS1P29558 406 aaKnown RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 CSRP2Q16527 193 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ARMCX5Q6P1M9 558 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 MIR1-1HGQ9H1L0 117 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ERVK-5Q9HDB9 667 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 POLMQ9NP87 494 aaPredicted RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 FAM217BQ9NTX9 383 aaPredicted RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ERAP1Q9NZ08 941 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 PARP2Q9UGN5 583 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 PLAGL2Q9UPG8 496 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 UMODL1Q5DID0 1318 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ADAMTS4O75173 837 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 KIF4AO95239 1232 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 LIG1P18858 919 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 HYAL1Q12794 435 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ZNF618Q5T7W0 954 aa4.96□□□□□ -1.62
GABRA1-220ENST00000638159 FAM163AQ96GL9 167 aaPredicted RBP4.96□□□□□ -1.62
GABRA1-220ENST00000638159 ADAM2Q99965 735 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms