RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MICALL1Q8N3F8 863 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 SEPT8Q92599 483 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 ZNF302Q9NR11 478 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 KIF28PB7ZC32 967 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 ME3Q16798 604 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 MCTP2Q6DN12 878 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 MIS18BP1Q6P0N0 1132 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 PDXDC2PQ6P474 469 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
PNKP-230ENST00000638016 RPAINQ86UA6 219 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 IFIH1Q9BYX4 1025 aaKnown RBP20.1■□□□□ 0.81
PNKP-230ENST00000638016 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
PNKP-230ENST00000638016 CUL9Q8IWT3 2517 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 RRN3P2A6NIE6 340 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 DLL1O00548 723 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 MRPS6P82932 125 aaKnown RBP20.09■□□□□ 0.81
PNKP-230ENST00000638016 FBXO47Q5MNV8 452 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 MTHFD1LQ6UB35 978 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 DAGLBQ8NCG7 672 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 OXER1Q8TDS5 423 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 ATP8B4Q8TF62 1192 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 IL17RAQ96F46 866 aa20.09■□□□□ 0.81
PNKP-230ENST00000638016 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
PNKP-230ENST00000638016 ZBTB42B2RXF5 422 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 CHMP2AO43633 222 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 EFCAB14O75071 495 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 UPP2O95045 317 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 AMHP03971 560 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 ST3GAL1Q11201 340 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 UGCGQ16739 394 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 INF2Q27J81 1249 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 FAM160B1Q5W0V3 765 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 ZNF746Q6NUN9 644 aaPredicted RBP20.08■□□□□ 0.81
PNKP-230ENST00000638016 GDPD5Q8WTR4 605 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 RAD9AQ99638 391 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 PHF20Q9BVI0 1012 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 TBC1D22BQ9NU19 505 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 GABBR1Q9UBS5 961 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 PCDHA2Q9Y5H9 948 aa20.08■□□□□ 0.81
PNKP-230ENST00000638016 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 LINC01553A4QN01 128 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 FDPSP14324 419 aaKnown RBP20.07■□□□□ 0.8
PNKP-230ENST00000638016 KLRC1P26715 233 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 FOSBP53539 338 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 RSPH3Q86UC2 560 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 LINC01599Q8WXQ3 324 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 PPP1R16BQ96T49 567 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 UNC45AQ9H3U1 944 aa20.07■□□□□ 0.8
PNKP-230ENST00000638016 ORC3Q9UBD5 711 aaPredicted RBP20.07■□□□□ 0.8
PNKP-230ENST00000638016 MAFBQ9Y5Q3 323 aaPredicted RBP20.07■□□□□ 0.8
PNKP-230ENST00000638016 SPTBN5Q9NRC6 3674 aaKnown RBP20.07■□□□□ 0.8
PNKP-230ENST00000638016 TRANK1O15050 2925 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 IGSF9BQ9UPX0 1349 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 FAM205CA6NFA0 338 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 SLC37A4O43826 429 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 HBP1O60381 514 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 JAK2O60674 1132 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 LPXNO60711 386 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 CD52P31358 61 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 SLC26A2P50443 739 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 USP11P51784 963 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 NEK4P51957 841 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 KRT76Q01546 638 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 GRB10Q13322 594 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 EARS2Q5JPH6 523 aaKnown RBP20.06■□□□□ 0.8
PNKP-230ENST00000638016 SLC5A5Q92911 643 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 COL25A1Q9BXS0 654 aaPredicted RBP20.06■□□□□ 0.8
PNKP-230ENST00000638016 SAMM50Q9Y512 469 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 PCDHA10Q9Y5I2 948 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 TRPV2Q9Y5S1 764 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 MTCH2Q9Y6C9 303 aa20.06■□□□□ 0.8
PNKP-230ENST00000638016 ZNF862O60290 1169 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 GAS7O60861 476 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 CDKL5O76039 1030 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 HTRA4P83105 476 aaPredicted RBP20.05■□□□□ 0.8
PNKP-230ENST00000638016 NONOQ15233 471 aaKnown RBP eCLIP20.05■□□□□ 0.8
PNKP-230ENST00000638016 ANKRD1Q15327 319 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 C8orf34Q49A92 452 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 LRCH2Q5VUJ6 765 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
PNKP-230ENST00000638016 GTF3C6Q969F1 213 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 TOP1MTQ969P6 601 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 C17orf80Q9BSJ5 609 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 CDHR5Q9HBB8 845 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 DISC1Q9NRI5 854 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 GINS2Q9Y248 185 aa20.05■□□□□ 0.8
PNKP-230ENST00000638016 TTC3P53804 2025 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 SMIM35A0A1B0GVV1 85 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 WDR64B1ANS9 1081 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 PSMD10O75832 226 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 C22orf31O95567 290 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 PSAPP07602 524 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 TMEM266Q2M3C6 531 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 Q4G0T1 1027 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 TSHZ1Q6ZSZ6 1077 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 NSUN7Q8NE18 718 aaKnown RBP20.04■□□□□ 0.8
PNKP-230ENST00000638016 ETNPPLQ8TBG4 499 aa20.04■□□□□ 0.8
PNKP-230ENST00000638016 TMEM40Q8WWA1 233 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms