RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 EBAG9O00559 213 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CEP104O60308 925 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 GCNT3O95395 438 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 PON1P27169 355 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 RPA1P27694 616 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 ZNF76P36508 570 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CRKP46108 304 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 APOBEC3HQ6NTF7 200 aaKnown RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 IRF2BP2Q7Z5L9 587 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 FAM107BQ9H098 131 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 EHD4Q9H223 541 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 BTNL10A8MVZ5 291 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 PDXKO00764 312 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 TBX3O15119 743 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 CLIC2O15247 247 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 RAD51CO43502 376 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 FLOT1O75955 427 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 KIF4AO95239 1232 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 ATP1A2P50993 1020 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 SPIRE1Q08AE8 756 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 ALKBH5Q6P6C2 394 aaKnown RBP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 DNAAF5Q86Y56 855 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 WHAMMQ8TF30 809 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 DNAJC18Q9H819 358 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
PSPC1-207ENST00000635251 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.53
PSPC1-207ENST00000635251 GRIN2DO15399 1336 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 A6NNZ2 444 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 RSPH10B2B2RC85 870 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 AKAP3O75969 853 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 NR3C1P04150 777 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 RSPH10BP0C881 870 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 ICA1Q05084 483 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 PDCLQ13371 301 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 Q4G0T1 1027 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 MAATS1Q7Z4T9 603 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 PBKQ96KB5 322 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 NAGPAQ9UK23 515 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.54
PSPC1-207ENST00000635251 FAM86B1E9PN63 330 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 CES2O00748 559 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 FAM86B2P0C5J1 330 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 SKOR1P84550 965 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 EPM2AIP1Q7L775 607 aaPredicted RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 PPM1EQ8WY54 764 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 MKL1Q969V6 931 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 FAM20AQ96MK3 541 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 GCNT4Q9P109 453 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 THSD7AQ9UPZ6 1657 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 ASTN1O14525 1302 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 SLC16A3O15427 465 aaKnown RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 ZEB2O60315 1214 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 GDF11O95390 407 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 HOXD13P35453 343 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 CASP4P49662 377 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 EPHA7Q15375 998 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 TRADDQ15628 312 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 TTC31Q49AM3 519 aaPredicted RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 MREGQ8N565 214 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 LMBR1Q8WVP7 490 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
PSPC1-207ENST00000635251 PI4KBQ9UBF8 816 aa11.7□□□□□ -0.54
PSPC1-207ENST00000635251 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 GOLGA6L10A6NI86 522 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 ZNF233A6NK53 670 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 F5H6K3 240 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 MSH4O15457 936 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 FAM13AO94988 1023 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 H2AFZP0C0S5 128 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms