RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
SNRPA1-216ENST00000626000 M0QZ92 97 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 MAGEB2O15479 319 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 TREHO43280 583 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 CHMP2AO43633 222 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 FGBP02675 491 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 THPOP40225 353 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 CCL23P55773 120 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 PSMC5P62195 406 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 EARS2Q5JPH6 523 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 TTC38Q5R3I4 469 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 MCTP1Q6DN14 999 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 GPR153Q6NV75 609 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 BRAPQ7Z569 592 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 NME8Q8N427 588 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 RNPC3Q96LT9 517 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 CTAGE1Q96RT6 745 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 JPH2Q9BR39 696 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 VAV3Q9UKW4 847 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 PCDHA2Q9Y5H9 948 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 TRIOBPQ9H2D6 2365 aa15.75■□□□□ 0.11
SNRPA1-216ENST00000626000 RSPH10B2B2RC85 870 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 DTNBO60941 627 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 BAIAP3O94812 1187 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 OATP04181 439 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 P4HBP07237 508 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 HSP90AA1P07900 732 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 RSPH10BP0C881 870 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 EPHA7Q15375 998 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 TRIM71Q2Q1W2 868 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 XKR3Q5GH77 459 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 IER5Q5VY09 327 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 HAS1Q92839 578 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 TELO2Q9Y4R8 837 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 WDR81Q562E7 1941 aa15.74■□□□□ 0.11
SNRPA1-216ENST00000626000 SMIM35A0A1B0GVV1 85 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 BMP15O95972 392 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 TMOD1P28289 359 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 MCM7P33993 719 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 PRKCEQ02156 737 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 FAM26DQ5JW98 314 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 USP38Q8NB14 1042 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 HERVK_113Q902F9 699 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 DHX38Q92620 1227 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 MTMR9Q96QG7 549 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
SNRPA1-216ENST00000626000 UMODL1Q5DID0 1318 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 CXCL10P02778 98 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 IGBP1P78318 339 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 ZNF200P98182 395 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 CDC42EP1Q00587 391 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 SHHQ15465 462 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 TMEM240Q5SV17 173 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 OTUD6AQ7L8S5 288 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 PPP1R13LQ8WUF5 828 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 APBB2Q92870 758 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 SCLYQ96I15 445 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.112e-8■□□□□ 10.1
SNRPA1-216ENST00000626000 NIFKQ9BYG3 293 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 FTOQ9C0B1 505 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 ZSWIM4Q9H7M6 989 aa15.72■□□□□ 0.11
SNRPA1-216ENST00000626000 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 KLRC1P26715 233 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 PRPHP41219 470 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 TXKP42681 527 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 SMAD3P84022 425 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 MARCH8Q5T0T0 291 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 HAUS3Q68CZ6 603 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 NCAPH2Q6IBW4 605 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 CNKSR3Q6P9H4 555 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 MTHFD1LQ6UB35 978 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 ZNF365Q70YC5 407 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 UIMC1Q96RL1 719 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 MAP7D2Q96T17 732 aa15.71■□□□□ 0.11
SNRPA1-216ENST00000626000 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 MUTP22033 750 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 DNM2P50570 870 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 MRPS6P82932 125 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 HIC1Q14526 733 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 RASIP1Q5U651 963 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 PHOSPHO2Q8TCD6 241 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 SEPT8Q92599 483 aa15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 SEPT9Q9UHD8 586 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-216ENST00000626000 RANBP2P49792 3224 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms