RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 KLHL23Q8NBE8 558 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 CDHR1Q96JP9 859 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 JPH1Q9HDC5 661 aaPredicted RBP12.66□□□□□ -0.38
DDX41-218ENST00000625286 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 RWDD3Q9Y3V2 267 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
DDX41-218ENST00000625286 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
DDX41-218ENST00000625286 IGSF9BQ9UPX0 1349 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 ZDBF2Q9HCK1 2354 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 MAFGO15525 162 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 ATG7O95352 703 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 EYA4O95677 639 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 CCNE2O96020 404 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 GNAQP50148 359 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 NHLH1Q02575 133 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 HERC4Q5GLZ8 1057 aaPredicted RBP12.65□□□□□ -0.38
DDX41-218ENST00000625286 CASC1Q6TDU7 716 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 CMTR2Q8IYT2 770 aaKnown RBP12.65□□□□□ -0.38
DDX41-218ENST00000625286 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 TMEM40Q8WWA1 233 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 P2RX5Q93086 422 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 CELF4Q9BZC1 486 aaKnown RBP12.65□□□□□ -0.38
DDX41-218ENST00000625286 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 TRPV2Q9Y5S1 764 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
DDX41-218ENST00000625286 MEIS1O00470 390 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 ATP4AP20648 1035 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 STAT5BP51692 787 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 SMAD4Q13485 552 aaKnown RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 IER5Q5VY09 327 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 CREB3L3Q68CJ9 461 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 VN1R2Q8NFZ6 395 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 POF1BQ8WVV4 589 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 PHOX2BQ99453 314 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
DDX41-218ENST00000625286 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
DDX41-218ENST00000625286 NFASCO94856 1347 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 CNTNAP5Q8WYK1 1306 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 STXBP3O00186 592 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 SCG2P13521 617 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 KLRC1P26715 233 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 NRIP1P48552 1158 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 MRE11P49959 708 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
DDX41-218ENST00000625286 FAM102BQ5T8I3 360 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 IER5LQ5T953 404 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 ABHD15Q6UXT9 468 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 EFHBQ8N7U6 833 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 SMRP1Q8NCR6 262 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 FTHL17Q9BXU8 183 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 ERVK-5Q9HDB9 667 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
DDX41-218ENST00000625286 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
DDX41-218ENST00000625286 LOC730098B7Z3J9 87 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 FAM86B1E9PN63 330 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 PER2O15055 1255 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 FAM86B2P0C5J1 330 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 CALM1P0DP23 149 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 CALM2P0DP24 149 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 CALM3P0DP25 149 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
DDX41-218ENST00000625286 ERVFC1P60507 584 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 KRT76Q01546 638 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 COASYQ13057 564 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 PAK2Q13177 524 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
DDX41-218ENST00000625286 NAALADL2Q58DX5 795 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms