RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
LINC00963-220ENST00000625171 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 IQSEC1Q6DN90 963 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 CCDC65Q8IXS2 484 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
LINC00963-220ENST00000625171 SEPT1Q8WYJ6 367 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 KCNN1Q92952 543 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 TINF2Q9BSI4 451 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 BHMT2Q9H2M3 363 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 WRAP73Q9P2S5 460 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-220ENST00000625171 RWDD2AQ9UIY3 292 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 PCDHA2Q9Y5H9 948 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 BRCA2P51587 3418 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 GSTTP1A0A1W2PQM5 241 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 BECN2A8MW95 431 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 CHMP2AO43633 222 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 LGR5O75473 907 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 KIF20AO95235 890 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 MAPTP10636 758 aaKnown RBP13.08□□□□□ -0.32
LINC00963-220ENST00000625171 GAP43P17677 238 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 RARRES1P49788 294 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 ASIC1P78348 528 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 STIM1Q13586 685 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 GPBP1Q86WP2 473 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 RNF214Q8ND24 703 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
LINC00963-220ENST00000625171 ARMC5Q96C12 935 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 PDLIM2Q96JY6 352 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-220ENST00000625171 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 IGSF9BQ9UPX0 1349 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
LINC00963-220ENST00000625171 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-220ENST00000625171 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
LINC00963-220ENST00000625171 SCP2P22307 547 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 YWHABP31946 246 aaKnown RBP13.07□□□□□ -0.32
LINC00963-220ENST00000625171 RGS2P41220 211 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 PRCPP42785 496 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 TPM4P67936 248 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 SPATA1Q5VX52 437 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 CYFIP1Q7L576 1253 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 MED15Q96RN5 788 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 NIFKQ9BYG3 293 aaKnown RBP13.07□□□□□ -0.32
LINC00963-220ENST00000625171 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 PANK4Q9NVE7 773 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 Q9Y3F1 56 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 CENPFP49454 3210 aa13.07□□□□□ -0.32
LINC00963-220ENST00000625171 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
LINC00963-220ENST00000625171 PSMA7O14818 248 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 ZNF862O60290 1169 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 GGPS1O95749 300 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 TXNP10599 105 aaKnown RBP13.06□□□□□ -0.32
LINC00963-220ENST00000625171 ZNF18P17022 549 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 RTP1P59025 263 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 STK4Q13043 487 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 EXOC8Q8IYI6 725 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
LINC00963-220ENST00000625171 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 TMEM174Q8WUU8 243 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 GPR20Q99678 358 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
LINC00963-220ENST00000625171 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 PTPN22Q9Y2R2 807 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 EMSYQ7Z589 1322 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
LINC00963-220ENST00000625171 A0A087WWV3 80 aa13.05□□□□□ -0.32
LINC00963-220ENST00000625171 BICDL2A1A5D9 508 aa13.05□□□□□ -0.32
LINC00963-220ENST00000625171 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
LINC00963-220ENST00000625171 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms