RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 FAM98CQ17RN3 349 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ARHGEF16Q5VV41 709 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 HIPK4Q8NE63 616 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SPATA4Q8NEY3 305 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ABTB1Q969K4 478 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 COX16Q9P0S2 106 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 UBN2Q6ZU65 1347 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 A0A0G2JND7 137 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MAPK13O15264 365 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MAP3K7O43318 606 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 FMR1Q06787 632 aaKnown RBP eCLIP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TAF12Q16514 161 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 ASPRV1Q53RT3 343 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 HSP90AA5PQ58FG0 334 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GPATCH4Q5T3I0 446 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 NME8Q8N427 588 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PPWD1Q96BP3 646 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 HAUS1Q96CS2 278 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 SPDL1Q96EA4 605 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 CARD10Q9BWT7 1032 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 BHMT2Q9H2M3 363 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 RGPD1P0DJD0 1748 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 USP54Q70EL1 1684 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 KRT1P04264 644 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GSTA1P08263 222 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PDHA1P08559 390 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GSTA2P09210 222 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GCFC2P16383 781 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GAP43P17677 238 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MXI1P50539 228 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 LRRC14Q15048 493 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 DLGAP5Q15398 846 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 FAM83BQ5T0W9 1011 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 SRRM1Q8IYB3 904 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 LARGE2Q8N3Y3 721 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TTLL11Q8NHH1 800 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PIP4K2CQ8TBX8 421 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 NLRP7Q8WX94 980 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 CDKL2Q92772 493 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TSC22D3Q99576 134 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 IL25Q9H293 177 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MYOM1P52179 1685 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 LOC102724159A0A0B4J2E5 919 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 P4HA1P13674 534 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PDE6BP35913 854 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GABPAQ06546 454 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PWP2Q15269 919 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 NBPF9Q3BBW0 867 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MARCH10Q8NA82 808 aaPredicted RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MAML1Q92585 1016 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 SAAL1Q96ER3 474 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 ATP6V1G3Q96LB4 118 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF577Q9BSK1 485 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 CDCA7Q9BWT1 371 aaPredicted RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TSPYL2Q9H2G4 693 aaPredicted RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 LY9Q9HBG7 655 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TRPM3Q9HCF6 1732 aaPredicted RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 GOLGA8JA6NMD2 632 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 NMT2O60551 498 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TOM1L1O75674 476 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TNNC2P02585 160 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 DDIT3P35638 169 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 RWDD2BP57060 319 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 UNC13DQ70J99 1090 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 ZC3H18Q86VM9 953 aaKnown RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 PDZD8Q8NEN9 1154 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 HEMGNQ9BXL5 484 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 CALN1Q9BXU9 219 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 KLC4Q9NSK0 619 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 CEP72Q9P209 647 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TRIM10Q9UDY6 481 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 MAGED2Q9UNF1 606 aaPredicted RBP6.07□□□□□ -1.44
ERCC6-213ENST00000624341 BCL9LQ86UU0 1499 aa6.07□□□□□ -1.44
ERCC6-213ENST00000624341 TCP10L2B9ZVM9 353 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TTLL1O95922 423 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CYP2D6P10635 497 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PLS3P13797 630 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 USPL1Q5W0Q7 1092 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 SYNE4Q8N205 404 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 MCUQ8NE86 351 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 KANSL2Q9H9L4 492 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 PARVGQ9HBI0 331 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 DNAJC12Q9UKB3 198 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RASA4BC9J798 803 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CAPN9O14815 690 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 CFLARO15519 480 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 RASA4O43374 803 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 POLGP54098 1239 aaPredicted RBP6.06□□□□□ -1.44
ERCC6-213ENST00000624341 KCNH2Q12809 1159 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 BIRC2Q13490 618 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 TXNRD1Q16881 649 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 GRAMD1BQ3KR37 738 aa6.06□□□□□ -1.44
ERCC6-213ENST00000624341 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms