RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 GOLGA8KD6RF30 607 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 SLC37A4O43826 429 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 TDP2O95551 362 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 VAV2P52735 878 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 SPA17Q15506 151 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 PABPC1LQ4VXU2 614 aaKnown RBP13.58□□□□□ -0.24
LITAF-221ENST00000622633 TEKT4Q8WW24 435 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 MMRN2Q9H8L6 949 aa13.58□□□□□ -0.24
LITAF-221ENST00000622633 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 EDIL3O43854 480 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 UFL1O94874 794 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 RFC4P35249 363 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 PPP1R2P41236 205 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 CKAP4Q07065 602 aaKnown RBP13.57□□□□□ -0.24
LITAF-221ENST00000622633 FIGNQ5HY92 759 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 MYCBPAPQ8TBZ2 947 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 CDK5RAP3Q96JB5 506 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
LITAF-221ENST00000622633 PURBQ96QR8 312 aaKnown RBP13.57□□□□□ -0.24
LITAF-221ENST00000622633 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 ARHGAP20Q9P2F6 1191 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 CREB3O43889 395 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 SCTRP47872 440 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 RHBDL3P58872 404 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 CDK17Q00537 523 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 C2orf54Q08AI8 447 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 LRRC41Q15345 812 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 GSPT2Q8IYD1 628 aaKnown RBP13.57□□□□□ -0.24
LITAF-221ENST00000622633 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 SIK3Q9Y2K2 1263 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 ASB3Q9Y575 518 aa13.57□□□□□ -0.24
LITAF-221ENST00000622633 POTEMA6NI47 508 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 EIF4A3P38919 411 aaKnown RBP13.56□□□□□ -0.24
LITAF-221ENST00000622633 EIF6P56537 245 aaKnown RBP13.56□□□□□ -0.24
LITAF-221ENST00000622633 PABPC4Q13310 644 aaKnown RBP eCLIP13.56□□□□□ -0.248e-7■■■■■ 44.2
LITAF-221ENST00000622633 UNC13DQ70J99 1090 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
LITAF-221ENST00000622633 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
LITAF-221ENST00000622633 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 RIOX1Q9H6W3 641 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 PCDHA13Q9Y5I0 950 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 COBLL1Q53SF7 1204 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 TTMPQ5BVD1 217 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 KCNK18Q7Z418 384 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 TAX1BP1Q86VP1 789 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 RPGRIP1Q96KN7 1286 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 OSBPL1AQ9BXW6 950 aa13.56□□□□□ -0.24
LITAF-221ENST00000622633 IFIH1Q9BYX4 1025 aaKnown RBP13.56□□□□□ -0.24
LITAF-221ENST00000622633 ANO9A1A5B4 782 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
LITAF-221ENST00000622633 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 MOCS3O95396 460 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 SEC24CP53992 1094 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 PTGISQ16647 500 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 NLRP14Q86W24 1093 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 GJA10Q969M2 543 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 FAM167BQ9BTA0 163 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 PREBQ9HCU5 417 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 CAPN6Q9Y6Q1 641 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 PVALEFA0A1B0GWK0 134 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 F8VZ95 297 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 USO1O60763 962 aaKnown RBP13.55□□□□□ -0.24
LITAF-221ENST00000622633 MCM3P25205 808 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
LITAF-221ENST00000622633 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
LITAF-221ENST00000622633 ADCY7P51828 1080 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 KIF11P52732 1056 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 SLC7A5Q01650 507 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 MAN2A1Q16706 1144 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 TMEM266Q2M3C6 531 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 C15orf52Q6ZUT6 534 aaKnown RBP13.55□□□□□ -0.24
LITAF-221ENST00000622633 TMEM110Q86TL2 294 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 CREG2Q8IUH2 290 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 CCDC155Q8N6L0 562 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
LITAF-221ENST00000622633 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms