RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TMED5Q9Y3A6 229 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 V9GY48 417 aaPredicted RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 SCN7AQ01118 1682 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 A0A0G2JS52 829 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 NMT2O60551 498 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 PFDN1O60925 122 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 TACC1O75410 805 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 CAMTA2O94983 1202 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 NTSR2O95665 410 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 MYBL1P10243 752 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 BCRP11274 1271 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 HARSP12081 509 aaKnown RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 RXRBP28702 533 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 GSTT1P30711 240 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 KRT9P35527 623 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 PEX5P50542 639 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 SLC7A5Q01650 507 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 TMEM62Q0P6H9 643 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 ERMNQ8TAM6 284 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 PRCCQ92733 491 aaPredicted RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 KLHL29Q96CT2 875 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 HAPLN3Q96S86 360 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 SMC6Q96SB8 1091 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 CORO1BQ9BR76 489 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 MIS12Q9H081 205 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 RNF41Q9H4P4 317 aaPredicted RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 ECT2Q9H8V3 914 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 RMND1Q9NWS8 449 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 ABCF2Q9UG63 623 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 NFU1Q9UMS0 254 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 AGAP1Q9UPQ3 857 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 LRCH1Q9Y2L9 728 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 COMMD3-BMI1R4GMX3 469 aa8.15□□□□□ -1.1
TRIM49B-202ENST00000622138 MAGEB6P1A0A0J9YX57 407 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 HEXIM1O94992 359 aaKnown RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 PDHA1P08559 390 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 KRT16P08779 473 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 CALB2P22676 271 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 COPS2P61201 443 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 TROAPQ12815 778 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 TTC38Q5R3I4 469 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 NCCRP1Q6ZVX7 275 aaPredicted RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 ATP11CQ8NB49 1132 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 ESR2Q92731 530 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM136AQ96C01 138 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 GBP5Q96PP8 586 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF317Q96PQ6 595 aaPredicted RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 MTA3Q9BTC8 594 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 CCDC134Q9H6E4 229 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 TUBA8Q9NY65 449 aaPredicted RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 DDX25Q9UHL0 483 aaKnown RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 BARX2Q9UMQ3 279 aaPredicted RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 SH3GLB1Q9Y371 365 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 MYH14Q7Z406 1995 aaKnown RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF804BA4D1E1 1349 aa8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF335Q9H4Z2 1342 aaPredicted RBP8.15□□□□□ -1.11
TRIM49B-202ENST00000622138 H0YGN5 161 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 UBOX5O94941 541 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM153BP0C7A2 387 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 KLRK1P26718 216 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 TMOD1P28289 359 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CRKLP46109 303 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CARSP49589 748 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 BPIFB4P59827 614 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 USP46P62068 366 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 PTGDRQ13258 359 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 KRT31Q15323 416 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 MEA1Q16626 185 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM153CQ494X1 144 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 FOXB2Q5VYV0 432 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 TMTC3Q6ZXV5 915 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ASRGL1Q7L266 308 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 OGFOD1Q8N543 542 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 SRBD1Q8N5C6 995 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ENDOVQ8N8Q3 282 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 DNAJC9Q8WXX5 260 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 OXCT2Q9BYC2 517 aaPredicted RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 TAB2Q9NYJ8 693 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM153AQ9UHL3 310 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 TSKSQ9UJT2 592 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 SYNPO2Q9UMS6 1093 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF148Q9UQR1 794 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 NFS1Q9Y697 457 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 WNK3Q9BYP7 1800 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 O00370 1275 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 BIRC5O15392 142 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CYP2D6P10635 497 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms