RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 WDR64B1ANS9 1081 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 EIF2AK2P19525 551 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ANXA13P27216 316 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TBC1D1Q86TI0 1168 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ADD1P35611 737 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 SESN3P58005 492 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 PSMD2Q13200 908 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 CCL15Q16663 113 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 HADHQ16836 314 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 FAM83BQ5T0W9 1011 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 MCAMP43121 646 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 SCARF1Q14162 830 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 KYAT1Q16773 422 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 PEX26Q7Z412 305 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ACTN1P12814 892 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 STAT1P42224 750 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NELFCDQ8IXH7 590 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 KIF2CQ99661 725 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ZMYND10O75800 440 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ATP5HO75947 161 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 EPHX2P34913 555 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 RBL2Q08999 1139 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ZBTB33Q86T24 672 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 USP32Q8NFA0 1604 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ENC1O14682 589 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 MAP3K7O43318 606 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 SLC16A2P36021 539 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 CCZ1BP86790 482 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
COL25A1-209ENST00000622134 RSRC2Q7L4I2 434 aaKnown RBP11.29□□□□□ -0.6
COL25A1-209ENST00000622134 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
COL25A1-209ENST00000622134 NME8Q8N427 588 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 ANKRD42Q8N9B4 389 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
COL25A1-209ENST00000622134 PPP6R2O75170 966 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 TYW1BQ6NUM6 668 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 F8W8V4 182 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 ABL1P00519 1130 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 CYP2J2P51589 502 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 ITPK1Q13572 414 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 MORC3Q14149 939 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SFMBT2Q5VUG0 894 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 FAM20AQ96MK3 541 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SLIT1O75093 1534 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 STXBP3O00186 592 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 KRIT1O00522 736 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 NTSR2O95665 410 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 XPAP23025 273 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 MGARPQ8TDB4 240 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 OSBP2Q969R2 916 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 APOL6Q9BWW8 343 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 KIAA1586Q9HCI6 787 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 DCP1AQ9NPI6 582 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms