RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 LRRC32Q14392 662 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 GPR158Q5T848 1215 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 ESRP1Q6NXG1 681 aaKnown RBP4.88□□□□□ -1.63
MALAT1-216ENST00000620465 HDGFL2Q7Z4V5 671 aaPredicted RBP4.88□□□□□ -1.63
MALAT1-216ENST00000620465 NECAB2Q7Z6G3 386 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 TMEFF1Q8IYR6 380 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 TTLL6Q8N841 843 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 LINC00482Q8N8I6 264 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 PRPF38AQ8NAV1 312 aaKnown RBP4.88□□□□□ -1.63
MALAT1-216ENST00000620465 KYQ8NBH2 561 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 SLC5A5Q92911 643 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 ZMAT4Q9H898 229 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 SLC39A2Q9NP94 309 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
MALAT1-216ENST00000620465 PMF1-BGLAPU3KQ54 211 aa4.88□□□□□ -1.63
MALAT1-216ENST00000620465 UBA6A0AVT1 1052 aaPredicted RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ALG1L2C9J202 215 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 KRT1P04264 644 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 C1QTNF9P0C862 333 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 CD40P25942 277 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 MC4RP32245 332 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 LSP1P33241 339 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SESN3P58005 492 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 HTRA3P83110 453 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ADCY1Q08828 1119 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ADAM9Q13443 819 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SSPNQ14714 243 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SMAD2Q15796 467 aaKnown RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SKIDA1Q1XH10 827 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 IQSEC1Q6DN90 963 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 CNKSR3Q6P9H4 555 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 LHFPL2Q6ZUX7 228 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 RTN4RL1Q86UN2 441 aaPredicted RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 FAM129CQ86XR2 697 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 CILP2Q8IUL8 1156 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ANKRD13AQ8IZ07 590 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ERCC4Q92889 916 aaPredicted RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ZBTB8AQ96BR9 441 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 C16orf92Q96LL3 132 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ZSWIM3Q96MP5 696 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 NOX5Q96PH1 765 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 FOXB1Q99853 325 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SYT3Q9BQG1 590 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 C11orf84Q9BUA3 381 aaPredicted RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 INCENPQ9NQS7 918 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ARHGAP20Q9P2F6 1191 aa4.87□□□□□ -1.63
MALAT1-216ENST00000620465 SMG5Q9UPR3 1016 aaKnown RBP4.87□□□□□ -1.63
MALAT1-216ENST00000620465 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 PRAMEF22A3QJZ6 481 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 RAB11FIP3O75154 756 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 CYP7B1O75881 506 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 FBXO21O94952 628 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 MPIG6BO95866 241 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 THBS2P35442 1172 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 RAP1GAPP47736 663 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 LINC00310P59036 64 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 SMAD4Q13485 552 aaKnown RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 TERF2Q15554 542 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 KCNA10Q16322 511 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 ZNF385BQ569K4 471 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 BROXQ5VW32 411 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 PRAMEF18Q5VWM3 479 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 RPUSD2Q8IZ73 545 aaKnown RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 C7orf31Q8N865 590 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 ZNF610Q8N9Z0 462 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 CALML6Q8TD86 181 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 FOXRED1Q96CU9 486 aaPredicted RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 PWWP2AQ96N64 755 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 EPB41L4AQ9HCS5 686 aaPredicted RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 UCKL1Q9NWZ5 548 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 GALNT8Q9NY28 637 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 USP36Q9P275 1121 aaKnown RBP4.86□□□□□ -1.63
MALAT1-216ENST00000620465 ZFP69BQ9UJL9 534 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 WASF3Q9UPY6 502 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 KCTD3Q9Y597 815 aa4.86□□□□□ -1.63
MALAT1-216ENST00000620465 GOLGA6L22H0YM25 854 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 KDM1AO60341 852 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 PRLP01236 227 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 GLRBP48167 497 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 ALDH6A1Q02252 535 aaKnown RBP4.85□□□□□ -1.63
MALAT1-216ENST00000620465 ROM1Q03395 351 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 FAPQ12884 760 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 TTC38Q5R3I4 469 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 STK32CQ86UX6 486 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 PHYKPLQ8IUZ5 450 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 CLRN3Q8NCR9 226 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 FNIP1Q8TF40 1166 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 COG1Q8WTW3 980 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
MALAT1-216ENST00000620465 SLC5A4Q9NY91 659 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 CROTQ9UKG9 612 aa4.85□□□□□ -1.63
MALAT1-216ENST00000620465 PHLDB1Q86UU1 1377 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 NPIPB6E9PJ23 425 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 CHGBP05060 677 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 TXKP42681 527 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 ECE1P42892 770 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 GUCY2FP51841 1108 aa4.84□□□□□ -1.63
MALAT1-216ENST00000620465 CAP1Q01518 475 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms