RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 LEXMQ3ZCV2 418 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 TYW1BQ6NUM6 668 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
UPF3B-204ENST00000619445 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
UPF3B-204ENST00000619445 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 ENPP3O14638 875 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 BACH1O14867 736 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 ARP10275 920 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 HSPA4P34932 840 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 CTNNB1P35222 781 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 BMPR1AP36894 532 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 NAALADL2Q58DX5 795 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 MIS18BP1Q6P0N0 1132 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-204ENST00000619445 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 PPP2R3CQ969Q6 453 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 PCYT2Q99447 389 aa13.55□□□□□ -0.24
UPF3B-204ENST00000619445 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-204ENST00000619445 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
UPF3B-204ENST00000619445 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-204ENST00000619445 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 IPO5O00410 1097 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 CDC27P30260 824 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 KRT76Q01546 638 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 PAK2Q13177 524 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 BTG3Q14201 252 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 ABHD15Q6UXT9 468 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 CELF4Q9BZC1 486 aaKnown RBP13.54□□□□□ -0.24
UPF3B-204ENST00000619445 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
UPF3B-204ENST00000619445 DGKIO75912 1065 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 COL9A1P20849 921 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 KCNA5P22460 613 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 CD52P31358 61 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 Q6ZUG5 572 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 CRYGNQ8WXF5 182 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 BRF1Q92994 677 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 P2RX5Q93086 422 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
UPF3B-204ENST00000619445 PABPC5Q96DU9 382 aaKnown RBP13.53□□□□□ -0.24
UPF3B-204ENST00000619445 CCDC136Q96JN2 1154 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF577Q9BSK1 485 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
UPF3B-204ENST00000619445 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
UPF3B-204ENST00000619445 EVPLQ92817 2033 aa13.52□□□□□ -0.24
UPF3B-204ENST00000619445 FAM86B1E9PN63 330 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 PSAPP07602 524 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 FAM86B2P0C5J1 330 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 KLRC1P26715 233 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 APOBRQ0VD83 1088 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 COL19A1Q14993 1142 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.25
UPF3B-204ENST00000619445 PGBD1Q96JS3 809 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.25
UPF3B-204ENST00000619445 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 TMEM260Q9NX78 707 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
UPF3B-204ENST00000619445 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 GPR182O15218 404 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 MAGEB2O15479 319 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 CCNE2O96020 404 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 IFNAR1P17181 557 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 CIITAP33076 1130 aa13.51□□□□□ -0.25
UPF3B-204ENST00000619445 EVCP57679 992 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms