RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CAPN7Q9Y6W3 813 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 GOLGA6L10A6NI86 522 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 PGRMC1O00264 195 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 SART1O43290 800 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 HOXD13P35453 343 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 PSMC6P62333 389 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 HDLBPQ00341 1268 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 IFI16Q16666 785 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 DCAF17Q5H9S7 520 aaPredicted RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 LRIG3Q6UXM1 1119 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 SFR1Q86XK3 245 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 EIF1ADQ8N9N8 165 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 CCT8L2Q96SF2 557 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 NAP1L4Q99733 375 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 PAGR1Q9BTK6 254 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 TRAF3IP3Q9Y228 551 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 BZW2Q9Y6E2 419 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 H0YGN5 161 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 GUCY2CP25092 1073 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 HNRNPH1P31943 449 aaKnown RBP22.29■■□□□ 1.16
NEK3-208ENST00000618534 PPARDQ03181 441 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 GIT2Q14161 759 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 GPATCH4Q5T3I0 446 aaKnown RBP22.29■■□□□ 1.16
NEK3-208ENST00000618534 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 NFS1Q9Y697 457 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 BTAF1O14981 1849 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 TMCO5BA8MYB1 307 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 MEIS1O00470 390 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 PABPC4Q13310 644 aaKnown RBP eCLIP22.29■■□□□ 1.16
NEK3-208ENST00000618534 KNOP1Q1ED39 458 aaKnown RBP22.29■■□□□ 1.16
NEK3-208ENST00000618534 PRR5LQ6MZQ0 368 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 CALR3Q96L12 384 aaKnown RBP22.29■■□□□ 1.16
NEK3-208ENST00000618534 ANO3Q9BYT9 981 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 SERPINB13Q9UIV8 391 aa22.29■■□□□ 1.16
NEK3-208ENST00000618534 BHMG1C9JSJ3 638 aaPredicted RBP22.28■■□□□ 1.16
NEK3-208ENST00000618534 GCOM1H8Y6P7 765 aaPredicted RBP22.28■■□□□ 1.16
NEK3-208ENST00000618534 MYZAPP0CAP1 466 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 XRCC5P13010 732 aaKnown RBP22.28■■□□□ 1.16
NEK3-208ENST00000618534 SHMT1P34896 483 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 PRKCIP41743 596 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 FNTAP49354 379 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 CATSPER3Q86XQ3 398 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 CNPY4Q8N129 248 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.28■■□□□ 1.163e-10■■■■□ 19.3
NEK3-208ENST00000618534 REEP2Q9BRK0 252 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 NENFQ9UMX5 172 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 E7EVH7 732 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 F8W031 263 aaPredicted RBP22.28■■□□□ 1.16
NEK3-208ENST00000618534 MPHOSPH10O00566 681 aaKnown RBP22.28■■□□□ 1.16
NEK3-208ENST00000618534 FLOT1O75955 427 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 AKAP3O75969 853 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 ITGA4P13612 1032 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 ZNF844Q08AG5 666 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 EPHA7Q15375 998 aa22.28■■□□□ 1.16
NEK3-208ENST00000618534 KRIT1O00522 736 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 SLURP2P0DP57 97 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 CTNNA1P35221 906 aaKnown RBP22.27■■□□□ 1.16
NEK3-208ENST00000618534 FLT3P36888 993 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 GTF2IP78347 998 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 TCERG1LQ5VWI1 586 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 MICALCLQ6ZW33 695 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 EPM2AIP1Q7L775 607 aaPredicted RBP22.27■■□□□ 1.16
NEK3-208ENST00000618534 PEX26Q7Z412 305 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 LRRC45Q96CN5 670 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 SIX2Q9NPC8 291 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 SPIRE1Q08AE8 756 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 MCTP2Q6DN12 878 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 GJB7Q6PEY0 223 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 PRPF38AQ8NAV1 312 aaKnown RBP22.27■■□□□ 1.16
NEK3-208ENST00000618534 TBC1D16Q8TBP0 767 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 AMACRQ9UHK6 382 aa22.27■■□□□ 1.16
NEK3-208ENST00000618534 MYO1FO00160 1098 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 SLC26A4O43511 780 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 RAD21O60216 631 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 FSBPO95073 299 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 FAM107AO95990 144 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 CASP4P49662 377 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 PPANQ9NQ55 473 aaKnown RBP22.26■■□□□ 1.15
NEK3-208ENST00000618534 FBXL5Q9UKA1 691 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 PCDHA1Q9Y5I3 950 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 CYP3A7-CYP3A51PA0A087WV96 503 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 H2AFZP0C0S5 128 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 CYP3A7P24462 503 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 JAM2P57087 298 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 TRAPPC3LQ5T215 181 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 H2AFVQ71UI9 128 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 SLFN11Q7Z7L1 901 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 SLFN12Q8IYM2 578 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 MBOAT7Q96N66 472 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 BCAS3Q9H6U6 928 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 STXBP5LQ9Y2K9 1186 aa22.26■■□□□ 1.15
NEK3-208ENST00000618534 DDX3XO00571 662 aaKnown RBP eCLIP22.25■■□□□ 1.152e-8■□□□□ 8.3
NEK3-208ENST00000618534 DAPK3O43293 454 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 CALUO43852 315 aaPredicted RBP22.25■■□□□ 1.15
NEK3-208ENST00000618534 PRR16Q569H4 304 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 ARFGAP2Q8N6H7 521 aa22.25■■□□□ 1.15
NEK3-208ENST00000618534 ETNPPLQ8TBG4 499 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms