RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 SEMA4AQ9H3S1 761 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 RRAGCQ9HB90 399 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 KCNG1Q9UIX4 513 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 TCFL5Q9UL49 500 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 ZNF281Q9Y2X9 895 aa6.19□□□□□ -1.42
RFC3-203ENST00000616236 WASH4PA8MWX3 477 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 RASA4BC9J798 803 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 GOLIM4O00461 696 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 RASA4O43374 803 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 NPHS1O60500 1241 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 PEX2P28328 305 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 MOGSQ13724 837 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 SEC23AQ15436 765 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 ELF2Q15723 593 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFC3-203ENST00000616236 PGS1Q32NB8 556 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 RNF220Q5VTB9 566 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 NPNTQ6UXI9 565 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 KRBA2Q6ZNG9 492 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 SLC41A1Q8IVJ1 513 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 THEMISQ8N1K5 641 aaPredicted RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 FAM46AQ96IP4 442 aaKnown RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 HEXIM2Q96MH2 286 aaKnown RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 RIPOR3Q96MK2 946 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 CDC5LQ99459 802 aaKnown RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 PAGR1Q9BTK6 254 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
RFC3-203ENST00000616236 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 SAGE1Q9NXZ1 904 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 L1RE1Q9UN81 338 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 SCINQ9Y6U3 715 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 KAT6BQ8WYB5 2073 aa6.18□□□□□ -1.42
RFC3-203ENST00000616236 FAM95CA0A1B0GW59 222 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 PRRT4C9JH25 899 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 ALDH2P05091 517 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 FAM163BP0C2L3 166 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 BMP3P12645 472 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 FPR2P25090 351 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
RFC3-203ENST00000616236 HTR1BP28222 390 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 CHKAP35790 457 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 PIK3CBP42338 1070 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 PRIM2P49643 509 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 MANFP55145 182 aaKnown RBP6.17□□□□□ -1.42
RFC3-203ENST00000616236 BTKQ06187 659 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 NFKBIBQ15653 356 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 HSF5Q4G112 596 aaPredicted RBP6.17□□□□□ -1.42
RFC3-203ENST00000616236 FIGNQ5HY92 759 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 LVRNQ6Q4G3 990 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 LDHAL6AQ6ZMR3 332 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 TSPYL5Q86VY4 417 aaPredicted RBP6.17□□□□□ -1.42
RFC3-203ENST00000616236 NPAS3Q8IXF0 933 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 CLASRPQ8N2M8 674 aaKnown RBP6.17□□□□□ -1.42
RFC3-203ENST00000616236 NAT16Q8N8M0 369 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 PIP4K2CQ8TBX8 421 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 CCT6BQ92526 530 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 C16orf92Q96LL3 132 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 LRFN3Q9BTN0 628 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 NUP62CLQ9H1M0 184 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 SRPK3Q9UPE1 567 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 LRCH1Q9Y2L9 728 aa6.17□□□□□ -1.42
RFC3-203ENST00000616236 CLASP2O75122 1294 aaKnown RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 LPLP06858 475 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 CELA2BP08218 269 aaPredicted RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 CCT5P48643 541 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 EPHA7Q15375 998 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 PDCD2Q16342 344 aaPredicted RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 CCDC62Q6P9F0 684 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 LYPD4Q6UWN0 246 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 Q6ZS46 218 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 KRT78Q8N1N4 520 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 OR2C3Q8N628 320 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 VPS11Q9H270 941 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 TRIT1Q9H3H1 467 aaKnown RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 EPB41L1Q9H4G0 881 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 ARFGAP3Q9NP61 516 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 KCNH7Q9NS40 1196 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 USP36Q9P275 1121 aaKnown RBP6.16□□□□□ -1.42
RFC3-203ENST00000616236 DSEQ9UL01 958 aa6.16□□□□□ -1.42
RFC3-203ENST00000616236 CAPN8A6NHC0 703 aa6.15□□□□□ -1.42
RFC3-203ENST00000616236 LRRC10BA6NIK2 292 aa6.15□□□□□ -1.42
RFC3-203ENST00000616236 FAM155AB1AL88 458 aaPredicted RBP6.15□□□□□ -1.42
RFC3-203ENST00000616236 IGF2BP3O00425 579 aaKnown RBP eCLIP6.15□□□□□ -1.42
RFC3-203ENST00000616236 TERTO14746 1132 aaKnown RBP6.15□□□□□ -1.42
RFC3-203ENST00000616236 DTNBO60941 627 aa6.15□□□□□ -1.42
RFC3-203ENST00000616236 SLURP2P0DP57 97 aa6.15□□□□□ -1.42
RFC3-203ENST00000616236 MTHFD2P13995 350 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms