RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SQORQ9Y6N5 450 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 IGKV6D-21A0A0A0MT36 114 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 POTEB3A0JP26 581 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 M0QZ92 97 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 GRM6O15303 877 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 DGKIO75912 1065 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 CCNE2O96020 404 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 CPA1P15085 419 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 ZNF76P36508 570 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 RCAN1P53805 252 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 BTG3Q14201 252 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 COL19A1Q14993 1142 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 JAKMIP3Q5VZ66 844 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 POTEBQ6S5H4 581 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 MTHFD1LQ6UB35 978 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 LRFN3Q9BTN0 628 aa23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 C11orf84Q9BUA3 381 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC3-208ENST00000616074 IGSF9BQ9UPX0 1349 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 SMIM35A0A1B0GVV1 85 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 GRXCR2A6NFK2 248 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 FAM86B1E9PN63 330 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 HMGB1P09429 215 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 FAM86B2P0C5J1 330 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 ADD1P35611 737 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 PFKFB3Q16875 520 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 ABHD15Q6UXT9 468 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 EP400NLQ6ZTU2 488 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 NIPA1Q7RTP0 329 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 FTHL17Q9BXU8 183 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 CELF4Q9BZC1 486 aaKnown RBP23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 LMAN2LQ9H0V9 348 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 PADI3Q9ULW8 664 aa23.66■■□□□ 1.38
TRAPPC3-208ENST00000616074 ADAMTS3O15072 1205 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 SLC26A2P50443 739 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 METAP2P50579 478 aaKnown RBP eCLIP23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 APOBRQ0VD83 1088 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 PAK2Q13177 524 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 PLA2G4DQ86XP0 818 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 CCDC60Q8IWA6 550 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 GJD3Q8N144 294 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 CRIPAKQ8N1N5 446 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 CRYGNQ8WXF5 182 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 EVPLQ92817 2033 aa23.65■■□□□ 1.38
TRAPPC3-208ENST00000616074 KDM3AQ9Y4C1 1321 aa23.64■■□□□ 1.38
TRAPPC3-208ENST00000616074 C5orf42Q9H799 3197 aa23.64■■□□□ 1.38
TRAPPC3-208ENST00000616074 IGLV3-22A0A075B6J6 115 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 BACH1O14867 736 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 DHX15O43143 795 aaKnown RBP23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 SCG2P13521 617 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 FGD1P98174 961 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 PUS10Q3MIT2 529 aaKnown RBP23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 TMEM31Q5JXX7 168 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 Q6ZUG5 572 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 NPAS4Q8IUM7 802 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 UIMC1Q96RL1 719 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 C11orf16Q9NQ32 467 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 CLDND1Q9NY35 253 aa23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 MRPL42Q9Y6G3 142 aaKnown RBP23.64■■□□□ 1.37
TRAPPC3-208ENST00000616074 PI4K2BG5E9Z4 385 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 HBP1O60381 514 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 CSPG5O95196 566 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 KLRC1P26715 233 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 KRT76Q01546 638 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 TMEM266Q2M3C6 531 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 FAM160B1Q5W0V3 765 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 NME8Q8N427 588 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 ATP8B4Q8TF62 1192 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 KCNB2Q92953 911 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 TMX1Q9H3N1 280 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 ZNF302Q9NR11 478 aa23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 MYH9P35579 1960 aaKnown RBP23.63■■□□□ 1.37
TRAPPC3-208ENST00000616074 ESYT2A0FGR8 921 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 FAM86C2PA6NEL3 165 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 MMP1P03956 469 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 CYP3A4P08684 503 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 SSTR3P32745 418 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 CMTR2Q8IYT2 770 aaKnown RBP23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 BRF1Q92994 677 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 JAKMIP1Q96N16 626 aaKnown RBP23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 PLVAPQ9BX97 442 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 ZMYND12Q9H0C1 365 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 ALG13Q9NP73 1137 aaKnown RBP23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 NID2Q14112 1375 aa23.62■■□□□ 1.37
TRAPPC3-208ENST00000616074 WDR81Q562E7 1941 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 CCDC196A0A1B0GTZ2 297 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 IPO5O00410 1097 aaKnown RBP23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 LTBRP36941 435 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 HYAL1Q12794 435 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 PKN1Q16512 942 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 PAN2Q504Q3 1202 aaKnown RBP23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 MIS18BP1Q6P0N0 1132 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 PDXDC2PQ6P474 469 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 GINS2Q9Y248 185 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 SNX14Q9Y5W7 946 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 COL1A2P08123 1366 aa23.61■■□□□ 1.37
TRAPPC3-208ENST00000616074 ZBTB42B2RXF5 422 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 GPR37L1O60883 481 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 STAG3L1P0CL83 205 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 ATP4AP20648 1035 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 HSPA4P34932 840 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms