RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MAN2A1Q16706 1144 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 A6NNZ2 444 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 TUBB8Q3ZCM7 444 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF568Q3ZCX4 644 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 PROM2Q8N271 834 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCDC110Q8TBZ0 833 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 GPRASP2Q96D09 838 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 STRIP2Q9ULQ0 834 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 C17orf102A2RUQ5 167 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 FKBP3Q00688 224 aaKnown RBP10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 STILQ15468 1287 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 FKBP1CQ5VVH2 108 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 SEPT1Q8WYJ6 367 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 RWDD2AQ9UIY3 292 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 MSCO60682 206 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 CC2D1AQ6P1N0 951 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 TMX1Q9H3N1 280 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 DNAI1Q9UI46 699 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 POLRMTO00411 1230 aaKnown RBP10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 YY1P25490 414 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 XKR3Q5GH77 459 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 EPHA10Q5JZY3 1008 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 FYB2Q5VWT5 728 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 ENOSF1Q7L5Y1 443 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF609O15014 1411 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 H7C4K7 107 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 SLFN14P0C7P3 912 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 NEDD4P46934 1319 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 STAT5BP51692 787 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARHGAP15Q53QZ3 475 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
TNFRSF9-204ENST00000615230 KPNA2P52292 529 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 PI16Q6UXB8 463 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 NME8Q8N427 588 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 OR8K1Q8NGG5 319 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 POLR3FQ9H1D9 316 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 SLC39A2Q9NP94 309 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 HPCAL4Q9UM19 191 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 MAPK8IP1Q9UQF2 711 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 GEN1Q17RS7 908 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CDKL2Q92772 493 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 HEXIM2Q96MH2 286 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 SAMD15Q9P1V8 674 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 SLIT3O75094 1523 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CD4P01730 458 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CYP2D6P10635 497 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 IL1R1P14778 569 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 MXI1P50539 228 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCDC15Q0P6D6 951 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 RAD54LQ92698 747 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 TRIM56Q9BRZ2 755 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 IFIH1Q9BYX4 1025 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPANQ9NQ55 473 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 PVALEFA0A1B0GWK0 134 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 HBP1O60381 514 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 OAZ1P54368 228 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 IL18RAPO95256 599 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CYBBP04839 570 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 AKR1B1P15121 316 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF543Q08ER8 600 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 ASIC3Q9UHC3 531 aa10.55□□□□□ -0.72
TNFRSF9-204ENST00000615230 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CABYRO75952 493 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 PAK2Q13177 524 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 HVCN1Q96D96 273 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 ASPHQ12797 758 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 DRP2Q13474 957 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 KARSQ15046 597 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 SWSAP1Q6NVH7 229 aa10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 DCP1BQ8IZD4 617 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-204ENST00000615230 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms