RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 CENPKQ9BS16 269 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 FSD1LQ9BXM9 530 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 MRPL47Q9HD33 250 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 H0YC42 278 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 LRG1P02750 347 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 SMAD1Q15797 465 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 CA4P22748 312 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 SP110Q9HB58 689 aa12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
SLC6A6-204ENST00000613060 GUCA1AP43080 201 aaPredicted RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 GPR1P46091 355 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 PSMC5P62195 406 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 RAD51Q06609 339 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.9□□□□□ -0.349e-7■■■■■ 57.1
SLC6A6-204ENST00000613060 GJA10Q969M2 543 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 BUB1O43683 1085 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 PYGMP11217 842 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 NDE1Q9NXR1 346 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 AOX1Q06278 1338 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 SEMA3EO15041 775 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 MESDQ14696 234 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 GPATCH4Q5T3I0 446 aaKnown RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 STX19Q8N4C7 294 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 YME1L1Q96TA2 773 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 SLC16A2P36021 539 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 UHMK1Q8TAS1 419 aaKnown RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 SUN1O94901 812 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 AKT1P31749 480 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 KRT39Q6A163 491 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 OR9Q1Q8NGQ5 310 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 SMARCAD1Q9H4L7 1026 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
SLC6A6-204ENST00000613060 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 EIF3DO15371 548 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 GUCA1CO95843 209 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 NME3Q13232 169 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 ZNF304Q9HCX3 659 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 PSAPP07602 524 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 GNGT1P63211 74 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 APBA1Q02410 837 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 UBE3AQ05086 875 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 CPA1P15085 419 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 MT-ND3P03897 115 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 SLC8A1P32418 973 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 CLCN1P35523 988 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 HUNKP57058 714 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 BASP1P80723 227 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 FLOT2Q14254 428 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 TAF1BQ53T94 588 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 DCTN3O75935 186 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 SCG2P13521 617 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 EXD1Q8NHP7 514 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 MTBPQ96DY7 904 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 KIF17Q9P2E2 1029 aa12.89□□□□□ -0.35
SLC6A6-204ENST00000613060 IPO5O00410 1097 aaKnown RBP12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 CFLARO15519 480 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 TOM1L1O75674 476 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 MYO1DO94832 1006 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 CTSWP56202 376 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
SLC6A6-204ENST00000613060 IKBKBO14920 756 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms