RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GYS2P54840 703 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 NFRKBQ6P4R8 1299 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 AP1M1Q9BXS5 423 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 MAK16Q9BXY0 300 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 FAM204AQ9H8W3 233 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 PGRMC1O00264 195 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 PSMD14O00487 310 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 SLC16A4O15374 487 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 IFNB1P01574 187 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 VIMP08670 466 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 CDHR1Q96JP9 859 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 REEP2Q9BRK0 252 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 NSRP1Q9H0G5 558 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 ZNRF3Q9ULT6 936 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 ITIH6Q6UXX5 1313 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 TMEM191BP0C7N4 346 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 KCTD2Q14681 263 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 SERPINA10Q9UK55 444 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 GAS8O95995 478 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.127e-7■■■□□ 15.2
TCF3-220ENST00000611869 TTC19Q6DKK2 380 aaPredicted RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 MAGOHBQ96A72 148 aaKnown RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 FERMT1Q9BQL6 677 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 IQCGQ9H095 443 aaKnown RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 EYA4O95677 639 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 GRB10Q13322 594 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 GSPT2Q8IYD1 628 aaKnown RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 FBXO28Q9NVF7 368 aa14.28□□□□□ -0.12
TCF3-220ENST00000611869 PACSIN2Q9UNF0 486 aaPredicted RBP14.28□□□□□ -0.12
TCF3-220ENST00000611869 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 EZRP15311 586 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 ECE1P42892 770 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 QARSP47897 775 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 GNGT1P63211 74 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 ZRSR2Q15696 482 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 REXO1L1PQ8IX06 675 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 ACER1Q8TDN7 264 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 MYO1FO00160 1098 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 MTMR3Q13615 1198 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 UAP1Q16222 522 aaPredicted RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 MIS18BP1Q6P0N0 1132 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 RSBN1LQ6PCB5 846 aaPredicted RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.12
TCF3-220ENST00000611869 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.12
TCF3-220ENST00000611869 WDR64B1ANS9 1081 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 DENND2CQ68D51 928 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PDXDC1Q6P996 788 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 LRRC4BQ9NT99 713 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PTPN22Q9Y2R2 807 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PCDHB4Q9Y5E5 795 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 RNF40O75150 1001 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PSAPP07602 524 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.13
TCF3-220ENST00000611869 EPHB4P54760 987 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PPP2R5AQ15172 486 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 ANKS4BQ8N8V4 417 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 FAM151AQ8WW52 585 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 PPANQ9NQ55 473 aaKnown RBP14.27□□□□□ -0.13
TCF3-220ENST00000611869 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.13
TCF3-220ENST00000611869 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 TMOD1P28289 359 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
TCF3-220ENST00000611869 SLC17A8Q8NDX2 589 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 TBC1D22BQ9NU19 505 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 ACTN1P12814 892 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 MARK3P27448 753 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 PRAMEF18Q5VWM3 479 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 FAM160B1Q5W0V3 765 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 RIOX1Q9H6W3 641 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 KCNQ5Q9NR82 932 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 ZNF18P17022 549 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 SARSP49591 514 aaKnown RBP14.26□□□□□ -0.13
TCF3-220ENST00000611869 OSTNP61366 133 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 CLUL1Q15846 466 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
TCF3-220ENST00000611869 HGSO14964 777 aaPredicted RBP14.25□□□□□ -0.13
TCF3-220ENST00000611869 HIP1RO75146 1068 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 SLURP2P0DP57 97 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 MYBP10242 640 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 TAL1P17542 331 aaPredicted RBP14.25□□□□□ -0.13
TCF3-220ENST00000611869 MTMR2Q13614 643 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 EPHA7Q15375 998 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 PPP1R14CQ8TAE6 165 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 K7ERI5 159 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 HMGCS2P54868 508 aa14.25□□□□□ -0.13
TCF3-220ENST00000611869 DRAP1Q14919 205 aaPredicted RBP14.25□□□□□ -0.13
TCF3-220ENST00000611869 PPP2R5EQ16537 467 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms