RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 STIM2Q9P246 746 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 GOLGA6BA6NDN3 693 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 AFPP02771 609 aaKnown RBP18.91■□□□□ 0.62
NEK3-206ENST00000611833 MYBP10242 640 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 ACTN1P12814 892 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 ECE1P42892 770 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 BHMT2Q9H2M3 363 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
NEK3-206ENST00000611833 RNF14Q9UBS8 474 aa18.91■□□□□ 0.62
NEK3-206ENST00000611833 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
NEK3-206ENST00000611833 YDJCA8MPS7 323 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 PDXKO00764 312 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 TBCAO75347 108 aaKnown RBP18.9■□□□□ 0.62
NEK3-206ENST00000611833 FTCDO95954 541 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 XRCC5P13010 732 aaKnown RBP18.9■□□□□ 0.62
NEK3-206ENST00000611833 SLC9A1P19634 815 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 DCAF17Q5H9S7 520 aaPredicted RBP18.9■□□□□ 0.62
NEK3-206ENST00000611833 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 EPM2AIP1Q7L775 607 aaPredicted RBP18.9■□□□□ 0.62
NEK3-206ENST00000611833 RSPH10B2B2RC85 870 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 EML1O00423 815 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 RSPH10BP0C881 870 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 TCERG1LQ5VWI1 586 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 PACSIN1Q9BY11 444 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 BCAS3Q9H6U6 928 aa18.9■□□□□ 0.62
NEK3-206ENST00000611833 PIK3CDO00329 1044 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 GCNT3O95395 438 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 CYP3A4P08684 503 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 RPL13P26373 211 aaKnown RBP18.89■□□□□ 0.61
NEK3-206ENST00000611833 EXOC3L4Q17RC7 722 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 EIF2AK1Q9BQI3 630 aaKnown RBP18.89■□□□□ 0.61
NEK3-206ENST00000611833 POLD4Q9HCU8 107 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 PLCB1Q9NQ66 1216 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 RABGAP1Q9Y3P9 1069 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 AGPSO00116 658 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 UCHL3P15374 230 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 EPHB4P54760 987 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 GLE1Q53GS7 698 aaKnown RBP18.89■□□□□ 0.61
NEK3-206ENST00000611833 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 RUSC1Q9BVN2 902 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.89■□□□□ 0.61
NEK3-206ENST00000611833 TYW1Q9NV66 732 aaKnown RBP18.89■□□□□ 0.61
NEK3-206ENST00000611833 RGL1Q9NZL6 768 aa18.89■□□□□ 0.61
NEK3-206ENST00000611833 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
NEK3-206ENST00000611833 AKAP3O75969 853 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 NR3C1P04150 777 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 IVLP07476 585 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 EPB41P11171 864 aaKnown RBP18.88■□□□□ 0.61
NEK3-206ENST00000611833 STAT2P52630 851 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 PTK2Q05397 1052 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 CNKSR1Q969H4 720 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 POLR3CQ9BUI4 534 aaPredicted RBP18.88■□□□□ 0.61
NEK3-206ENST00000611833 METTL14Q9HCE5 456 aaKnown RBP18.88■□□□□ 0.61
NEK3-206ENST00000611833 PCDHGC5Q9Y5F6 944 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 EYA4O95677 639 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 PON1P27169 355 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 MEI1Q5TIA1 1274 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
NEK3-206ENST00000611833 BZW2Q9Y6E2 419 aaKnown RBP18.88■□□□□ 0.61
NEK3-206ENST00000611833 C10orf76Q5T2E6 689 aa18.87■□□□□ 0.61
NEK3-206ENST00000611833 DPY19L2P1Q6NXN4 242 aa18.87■□□□□ 0.61
NEK3-206ENST00000611833 EMBQ6PCB8 327 aa18.87■□□□□ 0.61
NEK3-206ENST00000611833 IRF2BP2Q7Z5L9 587 aa18.87■□□□□ 0.61
NEK3-206ENST00000611833 WDR18Q9BV38 432 aa18.87■□□□□ 0.61
NEK3-206ENST00000611833 HERC5Q9UII4 1024 aaKnown RBP18.87■□□□□ 0.61
NEK3-206ENST00000611833 PACSIN2Q9UNF0 486 aaPredicted RBP18.87■□□□□ 0.61
NEK3-206ENST00000611833 CLIC2O15247 247 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 CFBP00751 764 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 ZNF571Q7Z3V5 609 aaPredicted RBP18.86■□□□□ 0.61
NEK3-206ENST00000611833 IFT20Q8IY31 132 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 SYNPO2Q9UMS6 1093 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 ASTN1O14525 1302 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 SFI1A8K8P3 1242 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 POLD1P28340 1107 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 KCNA1Q09470 495 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 CTTNQ14247 550 aaKnown RBP18.86■□□□□ 0.61
NEK3-206ENST00000611833 BMT2Q1RMZ1 405 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 GBP6Q6ZN66 633 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 TPH2Q8IWU9 490 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 PIGOQ8TEQ8 1089 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 TAF4BQ92750 862 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 PCDHB13Q9Y5F0 798 aa18.86■□□□□ 0.61
NEK3-206ENST00000611833 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 GRID2IPA4D2P6 1211 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 GOLGA6CA6NDK9 693 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 SLC16A3O15427 465 aaKnown RBP18.85■□□□□ 0.61
NEK3-206ENST00000611833 RPS6KA5O75582 802 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 FAM13AO94988 1023 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 GOLGA6DP0CG33 693 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 CASP4P49662 377 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 EPHA7Q15375 998 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 RINT1Q6NUQ1 792 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
NEK3-206ENST00000611833 FAM76AQ8TAV0 307 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms