RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 NCK2O43639 380 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 IBSPP21815 317 aaPredicted RBP27.81■■■□□ 2.04
CDKN3-211ENST00000611205 ZNF76P36508 570 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 HYAL1Q12794 435 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 PAK2Q13177 524 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 CLUL1Q15846 466 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 CELF4Q9BZC1 486 aaKnown RBP27.81■■■□□ 2.04
CDKN3-211ENST00000611205 IGFLR1Q9H665 355 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 PADI3Q9ULW8 664 aa27.81■■■□□ 2.04
CDKN3-211ENST00000611205 MRPL42Q9Y6G3 142 aaKnown RBP27.81■■■□□ 2.04
CDKN3-211ENST00000611205 MYH9P35579 1960 aaKnown RBP27.8■■■□□ 2.04
CDKN3-211ENST00000611205 POTEB3A0JP26 581 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 STXBP3O00186 592 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 ALADP13716 330 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 LTBRP36941 435 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 PAN2Q504Q3 1202 aaKnown RBP27.8■■■□□ 2.04
CDKN3-211ENST00000611205 POTEBQ6S5H4 581 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 NPAS4Q8IUM7 802 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 PLVAPQ9BX97 442 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 IGSF9BQ9UPX0 1349 aa27.8■■■□□ 2.04
CDKN3-211ENST00000611205 GOLGA8AA7E2F4 631 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 GOLGA8BA8MQT2 603 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 hCG_1984214I3L0E3 225 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 MMP1P03956 469 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 STAG3L1P0CL83 205 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 EXOSC10Q01780 885 aaKnown RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 FUT2Q10981 343 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 MTHFD1LQ6UB35 978 aa27.79■■■□□ 2.04
CDKN3-211ENST00000611205 DHX32Q7L7V1 743 aaKnown RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 CMTR2Q8IYT2 770 aaKnown RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 ZNF713Q8N859 430 aaPredicted RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 NAP1L2Q9ULW6 460 aaPredicted RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 ARIH1Q9Y4X5 557 aaPredicted RBP27.79■■■□□ 2.04
CDKN3-211ENST00000611205 KLF18A0A0U1RQI7 1052 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 SMIM35A0A1B0GVV1 85 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 BACH1O14867 736 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 SCG2P13521 617 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 GTF2F1P35269 517 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDKN3-211ENST00000611205 SREBF1P36956 1147 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 KRT76Q01546 638 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 ZP2Q05996 745 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 DLX2Q07687 328 aaPredicted RBP27.78■■■□□ 2.04
CDKN3-211ENST00000611205 AP3B2Q13367 1082 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 SKAP1Q86WV1 359 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 BARHL2Q9NY43 387 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 PRKAG3Q9UGI9 489 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 PLAGL2Q9UPG8 496 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 GINS2Q9Y248 185 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 PLXNA4Q9HCM2 1894 aa27.78■■■□□ 2.04
CDKN3-211ENST00000611205 PRR33A8MZF0 331 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 MEIS1O00470 390 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 ATG7O95352 703 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 TMEM266Q2M3C6 531 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 CTC1Q2NKJ3 1217 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 ADCK5Q3MIX3 580 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 TEX2Q8IWB9 1127 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 NME8Q8N427 588 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 P2RX5Q93086 422 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 GLT8D2Q9H1C3 349 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 LRFN2Q9ULH4 789 aa27.77■■■□□ 2.04
CDKN3-211ENST00000611205 FNDC1Q4ZHG4 1894 aaPredicted RBP27.76■■■□□ 2.04
CDKN3-211ENST00000611205 KDM3AQ9Y4C1 1321 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 CCNE2O96020 404 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 KLRC1P26715 233 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 CLK2P49760 499 aaKnown RBP27.76■■■□□ 2.03
CDKN3-211ENST00000611205 SLC26A2P50443 739 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 NFX1Q12986 1120 aaKnown RBP27.76■■■□□ 2.03
CDKN3-211ENST00000611205 CSPP1Q1MSJ5 1256 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 BMP2KLQ5H9B9 411 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 JAKMIP3Q5VZ66 844 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 FAM160B1Q5W0V3 765 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 PLA2G4DQ86XP0 818 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 RASEFQ8IZ41 740 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 CRIPAKQ8N1N5 446 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 UIMC1Q96RL1 719 aa27.76■■■□□ 2.03
CDKN3-211ENST00000611205 LINC01565O15544 149 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 DCXO43602 365 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 HBP1O60381 514 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 ITGB1P05556 798 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 CDC27P30260 824 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 GATMP50440 423 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 CAMK1Q14012 370 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 ADHFE1Q8IWW8 467 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 TMX1Q9H3N1 280 aa27.75■■■□□ 2.03
CDKN3-211ENST00000611205 IGKV6D-21A0A0A0MT36 114 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 MBTPS2O43462 519 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 TBX10O75333 385 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 ABHD15Q6UXT9 468 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 CCDC60Q8IWA6 550 aaPredicted RBP27.74■■■□□ 2.03
CDKN3-211ENST00000611205 KLHL23Q8NBE8 558 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 ATP8B4Q8TF62 1192 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 PPP2R3CQ969Q6 453 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 ZNF302Q9NR11 478 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 FAM217BQ9NTX9 383 aaPredicted RBP27.74■■■□□ 2.03
CDKN3-211ENST00000611205 WDR81Q562E7 1941 aa27.74■■■□□ 2.03
CDKN3-211ENST00000611205 FAM86B1E9PN63 330 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 FAM86B2P0C5J1 330 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 DNAJB1P25685 340 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 FGD1P98174 961 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 SMAD2Q15796 467 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms