RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PUS10Q3MIT2 529 aaKnown RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 ZNF713Q8N859 430 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 CLP1Q92989 425 aaKnown RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 CELF4Q9BZC1 486 aaKnown RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 LMAN2LQ9H0V9 348 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 PADI3Q9ULW8 664 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 RALGAPA2Q2PPJ7 1873 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 SMIM35A0A1B0GVV1 85 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 DDX39AO00148 427 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 GPR37L1O60883 481 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 KLRC1P26715 233 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 SSTR3P32745 418 aaPredicted RBP15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 KRT32Q14532 448 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 JAKMIP3Q5VZ66 844 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 MTHFD1LQ6UB35 978 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 ABHD15Q6UXT9 468 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 PLA2G4DQ86XP0 818 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 CRIPAKQ8N1N5 446 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 NME8Q8N427 588 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 FTHL17Q9BXU8 183 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 CLDND1Q9NY35 253 aa15.25■□□□□ 0.03
POLR2J3-219ENST00000608621 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 IGKV6D-21A0A0A0MT36 114 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 BACH1O14867 736 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 HBP1O60381 514 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 CCNE2O96020 404 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 CPA1P15085 419 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 LTBRP36941 435 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 SLC26A2P50443 739 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 KRT76Q01546 638 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 COL19A1Q14993 1142 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 UIMC1Q96RL1 719 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 ALG13Q9NP73 1137 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 C11orf16Q9NQ32 467 aa15.24■□□□□ 0.03
POLR2J3-219ENST00000608621 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM86C2PA6NEL3 165 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 ADAMTS3O15072 1205 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 NCK2O43639 380 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 CDC45O75419 566 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 CSPG5O95196 566 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FGD1P98174 961 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 HYAL1Q12794 435 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 PAK2Q13177 524 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 PFKFB3Q16875 520 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 TMEM266Q2M3C6 531 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 SWSAP1Q6NVH7 229 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 NPAS4Q8IUM7 802 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM122AQ96E09 287 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 PLVAPQ9BX97 442 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 IGFLR1Q9H665 355 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 CDHR5Q9HBB8 845 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 MRPL42Q9Y6G3 142 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-219ENST00000608621 KDM3AQ9Y4C1 1321 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 CYP3A4P08684 503 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 SCG2P13521 617 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 PLA2G5P39877 138 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 METAP2P50579 478 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 RCAN1P53805 252 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 NFX1Q12986 1120 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 CAMK1Q14012 370 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 CTC1Q2NKJ3 1217 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 PAN2Q504Q3 1202 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 Q6ZUG5 572 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 KIAA0319LQ8IZA0 1049 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 CRYGNQ8WXF5 182 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 P2RX5Q93086 422 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 TMX1Q9H3N1 280 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 ZNF302Q9NR11 478 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 FAM50BQ9Y247 325 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
POLR2J3-219ENST00000608621 EVPLQ92817 2033 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 IGLV3-22A0A075B6J6 115 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 RPS6KA5O75582 802 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 MMP1P03956 469 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 ATP4AP20648 1035 aa15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 IBSPP21815 317 aaPredicted RBP15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 GTF2F1P35269 517 aaKnown RBP eCLIP15.21■□□□□ 0.03
POLR2J3-219ENST00000608621 GATMP50440 423 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms