RNA–Protein interactions for RNA: ENST00000608369.1

LINC00963-211, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 961 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-211ENST00000608369 HERC4Q5GLZ8 1057 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-211ENST00000608369 ALYREFQ86V81 257 aaKnown RBP12.85□□□□□ -0.35
LINC00963-211ENST00000608369 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-211ENST00000608369 P2RX5Q93086 422 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 MAP3K14Q99558 947 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 GPR20Q99678 358 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 FTHL17Q9BXU8 183 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
LINC00963-211ENST00000608369 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 WDFY4Q6ZS81 3184 aa12.85□□□□□ -0.35
LINC00963-211ENST00000608369 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 UPP2O95045 317 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 MMP1P03956 469 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 MRE11P49959 708 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 KRT85P78386 507 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 NHLH1Q02575 133 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 PKP1Q13835 747 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 HIC1Q14526 733 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 SEC23AQ15436 765 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 EP400NLQ6ZTU2 488 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 CYB5R4Q7L1T6 521 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 CATIPQ7Z7H3 387 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 TEX2Q8IWB9 1127 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 CUL5Q93034 780 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 SCAND2PQ9GZW5 306 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-211ENST00000608369 ZNF318Q5VUA4 2279 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 TRIOO75962 3097 aa12.84□□□□□ -0.35
LINC00963-211ENST00000608369 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 MAFGO15525 162 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-211ENST00000608369 CTSHP09668 335 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 IFNAR1P17181 557 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 GRM4Q14833 912 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 CYFIP1Q7L576 1253 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 FCHSD1Q86WN1 690 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 LARP6Q9BRS8 491 aaKnown RBP12.83□□□□□ -0.36
LINC00963-211ENST00000608369 IRF2BPLQ9H1B7 796 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 RC3H2Q9HBD1 1191 aaKnown RBP12.83□□□□□ -0.36
LINC00963-211ENST00000608369 SETD4Q9NVD3 440 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 ERAP1Q9NZ08 941 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 CFAP45Q9UL16 551 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
LINC00963-211ENST00000608369 KIF5BP33176 963 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 BTG3Q14201 252 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-211ENST00000608369 GSE1Q14687 1217 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 RTN1Q16799 776 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 IER5Q5VY09 327 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 BRAPQ7Z569 592 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 CMTR2Q8IYT2 770 aaKnown RBP12.82□□□□□ -0.36
LINC00963-211ENST00000608369 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 ZNF689Q96CS4 500 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-211ENST00000608369 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 CD207Q9UJ71 328 aa12.82□□□□□ -0.36
LINC00963-211ENST00000608369 MYO7AQ13402 2215 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 TTC3P53804 2025 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 MBLAC1A4D2B0 266 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-211ENST00000608369 RRN3P2A6NIE6 340 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 M0QZ92 97 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 MBTPS2O43462 519 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 EYA4O95677 639 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 XBP1P17861 261 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 IRS1P35568 1242 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 LTBRP36941 435 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 GNAQP50148 359 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
LINC00963-211ENST00000608369 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-211ENST00000608369 TRIM29Q14134 588 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 ZNF654Q8IZM8 581 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 EDAQ92838 391 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 C8orf76Q96K31 380 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 ZNF396Q96N95 335 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-211ENST00000608369 PIGSQ96S52 555 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-211ENST00000608369 TUBE1Q9UJT0 475 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
LINC00963-211ENST00000608369 JAK2O60674 1132 aa12.8□□□□□ -0.36
LINC00963-211ENST00000608369 DGKIO75912 1065 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms