RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 NTMQ9P121 344 aa6.77□□□□□ -1.33
UBE2E3-212ENST00000602888 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
UBE2E3-212ENST00000602888 ASB1Q9Y576 335 aa6.77□□□□□ -1.33
UBE2E3-212ENST00000602888 SH3D21A4FU49 640 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 FFAR3O14843 346 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 FBXO21O94952 628 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 FKBP9O95302 570 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 BPIP17213 487 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 RPL13P26373 211 aaKnown RBP6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 CFPP27918 469 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 MC4RP32245 332 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 ADCYAP1R1P41586 468 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 GLRBP48167 497 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 RTP5Q14D33 572 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 PHF19Q5T6S3 580 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 FKBP9P1Q75LS8 142 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 PASD1Q8IV76 773 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 LINC01356Q8N9X3 169 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 ZNF526Q8TF50 670 aaPredicted RBP6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 ERCC4Q92889 916 aaPredicted RBP6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 TTC1Q99614 292 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
UBE2E3-212ENST00000602888 PRAMEF22A3QJZ6 481 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 CPEP16870 476 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 PTX3P26022 381 aaPredicted RBP6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 PRAMEF18Q5VWM3 479 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 STRA8Q7Z7C7 330 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 E2F7Q96AV8 911 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 IFT22Q9H7X7 185 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 SPTLC3Q9NUV7 552 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 UCKL1Q9NWZ5 548 aa6.75□□□□□ -1.33
UBE2E3-212ENST00000602888 ANKRD62A6NC57 917 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 GOLGA6L22H0YM25 854 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 NEMP1O14524 444 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 ZEB2O60315 1214 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 MPIG6BO95866 241 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 NFKB2Q00653 900 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 EPHA7Q15375 998 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 VMACQ2NL98 169 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 ESRP1Q6NXG1 681 aaKnown RBP6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 RTN4RL1Q86UN2 441 aaPredicted RBP6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 NME9Q86XW9 330 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 C1QL4Q86Z23 238 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 ADGRG2Q8IZP9 1017 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 STPG3Q8N7X2 389 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 C16orf92Q96LL3 132 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 TACO1Q9BSH4 297 aaKnown RBP6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 GALNT8Q9NY28 637 aa6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 APOBEC2Q9Y235 224 aaKnown RBP6.74□□□□□ -1.33
UBE2E3-212ENST00000602888 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 TGM5O43548 720 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 IL18BPO95998 194 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 CHGBP05060 677 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 ZNF28P17035 718 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 MLLT6P55198 1093 aaPredicted RBP6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 SMAD2Q15796 467 aaKnown RBP6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 TRMT10BQ6PF06 316 aaKnown RBP6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 DPP8Q6V1X1 898 aaPredicted RBP6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 ZZZ3Q8IYH5 903 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 CARFQ8N187 725 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 FOXRED1Q96CU9 486 aaPredicted RBP6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 FOXB1Q99853 325 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 AMNQ9BXJ7 453 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 L2HGDHQ9H9P8 463 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
UBE2E3-212ENST00000602888 UBA6A0AVT1 1052 aaPredicted RBP6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 DDX3XO00571 662 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 BRINP1O60477 761 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 CD40P25942 277 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 IL13P35225 146 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 ECE1P42892 770 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 SMAD3P84022 425 aaKnown RBP6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 LRRC32Q14392 662 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 LRSAM1Q6UWE0 723 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 TP53I13Q8NBR0 393 aaPredicted RBP6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 WDR48Q8TAF3 677 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 CALML6Q8TD86 181 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 ZCCHC14Q8WYQ9 949 aaKnown RBP6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 BTBD2Q9BX70 525 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
UBE2E3-212ENST00000602888 EYA4O95677 639 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 KNG1P01042 644 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 ZSCAN22P10073 491 aaPredicted RBP6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 COL6A1P12109 1028 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 POU3F3P20264 500 aaPredicted RBP6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 ID4P47928 161 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 PHC1P78364 1004 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 IL13RA1P78552 427 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 STAT4Q14765 748 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 DDB1Q16531 1140 aa6.71□□□□□ -1.34
UBE2E3-212ENST00000602888 TTC38Q5R3I4 469 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms