RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SQORQ9Y6N5 450 aa15□□□□□ -0.01
RPS28-204ENST00000602140 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 GRXCR2A6NFK2 248 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 GRM6O15303 877 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 CDC45O75419 566 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 DGKIO75912 1065 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 HMGB1P09429 215 aaKnown RBP14.99□□□□□ -0.01
RPS28-204ENST00000602140 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
RPS28-204ENST00000602140 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 NIPA1Q7RTP0 329 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 RTN4RL1Q86UN2 441 aaPredicted RBP14.99□□□□□ -0.01
RPS28-204ENST00000602140 CLP1Q92989 425 aaKnown RBP14.99□□□□□ -0.01
RPS28-204ENST00000602140 LRFN3Q9BTN0 628 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 FTHL17Q9BXU8 183 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 CELF4Q9BZC1 486 aaKnown RBP14.99□□□□□ -0.01
RPS28-204ENST00000602140 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
RPS28-204ENST00000602140 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 IGKV6D-21A0A0A0MT36 114 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 SMIM35A0A1B0GVV1 85 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 FAM86B1E9PN63 330 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 BACH1O14867 736 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 CCNE2O96020 404 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 FAM86B2P0C5J1 330 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 CPA1P15085 419 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 SLC26A2P50443 739 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.012e-7■□□□□ 11
RPS28-204ENST00000602140 RCAN1P53805 252 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 APOBRQ0VD83 1088 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 PFKFB3Q16875 520 aaPredicted RBP14.98□□□□□ -0.01
RPS28-204ENST00000602140 PUS10Q3MIT2 529 aaKnown RBP14.98□□□□□ -0.01
RPS28-204ENST00000602140 TMEM31Q5JXX7 168 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 MTHFD1LQ6UB35 978 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 ABHD15Q6UXT9 468 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 PLA2G4DQ86XP0 818 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 GJD3Q8N144 294 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 UIMC1Q96RL1 719 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 LMAN2LQ9H0V9 348 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 CLDND1Q9NY35 253 aa14.98□□□□□ -0.01
RPS28-204ENST00000602140 CCDC196A0A1B0GTZ2 297 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 PI4K2BG5E9Z4 385 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 HBP1O60381 514 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 CSPG5O95196 566 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 SCG2P13521 617 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 KLRC1P26715 233 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 SSTR3P32745 418 aaPredicted RBP14.97□□□□□ -0.01
RPS28-204ENST00000602140 KRT76Q01546 638 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 PAK2Q13177 524 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 COL19A1Q14993 1142 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 FAM160B1Q5W0V3 765 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 Q6ZUG5 572 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 NPAS4Q8IUM7 802 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
RPS28-204ENST00000602140 CRIPAKQ8N1N5 446 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 NME8Q8N427 588 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 GINS2Q9Y248 185 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 TTC3P53804 2025 aa14.97□□□□□ -0.01
RPS28-204ENST00000602140 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 IGLV3-22A0A075B6J6 115 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 FAM86C2PA6NEL3 165 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 IPO5O00410 1097 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 DHX15O43143 795 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 CYP3A4P08684 503 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 STAG3L1P0CL83 205 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 TMEM266Q2M3C6 531 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 PAN2Q504Q3 1202 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 SWSAP1Q6NVH7 229 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 PDXDC2PQ6P474 469 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 CMTR2Q8IYT2 770 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 ATP8B4Q8TF62 1192 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 CRYGNQ8WXF5 182 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 BRF1Q92994 677 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 JAKMIP1Q96N16 626 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 PLVAPQ9BX97 442 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 ZMYND12Q9H0C1 365 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 TMX1Q9H3N1 280 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 C11orf16Q9NQ32 467 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 ZNF302Q9NR11 478 aa14.96□□□□□ -0.01
RPS28-204ENST00000602140 MRPL42Q9Y6G3 142 aaKnown RBP14.96□□□□□ -0.01
RPS28-204ENST00000602140 ESYT2A0FGR8 921 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 NCK2O43639 380 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 GPR37L1O60883 481 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 MMP1P03956 469 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 IBSPP21815 317 aaPredicted RBP14.95□□□□□ -0.02
RPS28-204ENST00000602140 LTBRP36941 435 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 HYAL1Q12794 435 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 NFX1Q12986 1120 aaKnown RBP14.95□□□□□ -0.02
RPS28-204ENST00000602140 PKN1Q16512 942 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 KIAA0319LQ8IZA0 1049 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 KCNB2Q92953 911 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 ZNF577Q9BSK1 485 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 C6orf50Q9HD87 102 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 LRFN2Q9ULH4 789 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 PLAGL2Q9UPG8 496 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 FAM50BQ9Y247 325 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 SNX14Q9Y5W7 946 aa14.95□□□□□ -0.02
RPS28-204ENST00000602140 ATP4AP20648 1035 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms