RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 INSL6Q9Y581 213 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 PRUNE2Q8WUY3 3088 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 GTPBP6O43824 516 aaPredicted RBP29.52■■■□□ 2.32
PNKP-216ENST00000601816 LPIN1Q14693 890 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 ANKRD1Q15327 319 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 IER5Q5VY09 327 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 GALNT17Q6IS24 598 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 SPRED2Q7Z698 418 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 MICALL1Q8N3F8 863 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 DAGLBQ8NCG7 672 aa29.52■■■□□ 2.32
PNKP-216ENST00000601816 PFKFB2O60825 505 aa29.51■■■□□ 2.31
PNKP-216ENST00000601816 FBXO47Q5MNV8 452 aa29.51■■■□□ 2.31
PNKP-216ENST00000601816 TBCKQ8TEA7 893 aa29.51■■■□□ 2.31
PNKP-216ENST00000601816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.5■■■□□ 2.31
PNKP-216ENST00000601816 LINC01553A4QN01 128 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 M0QZ92 97 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 EDIL3O43854 480 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 PSAPP07602 524 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 MTHFD1LQ6UB35 978 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 CKAP2LQ8IYA6 745 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 TGS1Q96RS0 853 aaKnown RBP29.5■■■□□ 2.31
PNKP-216ENST00000601816 PRDM6Q9NQX0 595 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 PCDHA10Q9Y5I2 948 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 TRPV2Q9Y5S1 764 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 COL1A2P08123 1366 aa29.5■■■□□ 2.31
PNKP-216ENST00000601816 STK36Q9NRP7 1315 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 SMIM35A0A1B0GVV1 85 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 POU3F3P20264 500 aaPredicted RBP29.49■■■□□ 2.31
PNKP-216ENST00000601816 AK2P54819 239 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 HTRA4P83105 476 aaPredicted RBP29.49■■■□□ 2.31
PNKP-216ENST00000601816 TSHZ1Q6ZSZ6 1077 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 TOP1MTQ969P6 601 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 IL17RAQ96F46 866 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 SAMM50Q9Y512 469 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 MTCH2Q9Y6C9 303 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 SIP14410 1827 aa29.49■■■□□ 2.31
PNKP-216ENST00000601816 M0R2N6 131 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 MSH4O15457 936 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 UPP2O95045 317 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 KLRC1P26715 233 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 ERVK-21P61565 698 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 GRB10Q13322 594 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 NPY5RQ15761 445 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 ZNF484Q5JVG2 852 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 YME1L1Q96TA2 773 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 COL25A1Q9BXS0 654 aaPredicted RBP29.48■■■□□ 2.31
PNKP-216ENST00000601816 MTUS1Q9ULD2 1270 aa29.48■■■□□ 2.31
PNKP-216ENST00000601816 MAFBQ9Y5Q3 323 aaPredicted RBP29.48■■■□□ 2.31
PNKP-216ENST00000601816 WDR64B1ANS9 1081 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 ATP4AP20648 1035 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 TMEM62Q0P6H9 643 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 NME8Q8N427 588 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 RIT2Q99578 217 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 THEGQ9P2T0 379 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 GABBR1Q9UBS5 961 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 KCNJ14Q9UNX9 436 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 SQORQ9Y6N5 450 aa29.47■■■□□ 2.31
PNKP-216ENST00000601816 GAS7O60861 476 aa29.46■■■□□ 2.31
PNKP-216ENST00000601816 XBP1P17861 261 aa29.46■■■□□ 2.31
PNKP-216ENST00000601816 LRCH2Q5VUJ6 765 aa29.46■■■□□ 2.31
PNKP-216ENST00000601816 SP7Q8TDD2 431 aaPredicted RBP29.46■■■□□ 2.31
PNKP-216ENST00000601816 BBXQ8WY36 941 aaPredicted RBP29.46■■■□□ 2.31
PNKP-216ENST00000601816 SLC5A5Q92911 643 aa29.46■■■□□ 2.31
PNKP-216ENST00000601816 TEKT3Q9BXF9 490 aa29.46■■■□□ 2.31
PNKP-216ENST00000601816 TDP2O95551 362 aa29.45■■■□□ 2.31
PNKP-216ENST00000601816 NONOQ15233 471 aaKnown RBP eCLIP29.45■■■□□ 2.31
PNKP-216ENST00000601816 Q4G0T1 1027 aa29.45■■■□□ 2.31
PNKP-216ENST00000601816 KRT25Q7Z3Z0 450 aa29.45■■■□□ 2.31
PNKP-216ENST00000601816 GDPD5Q8WTR4 605 aa29.45■■■□□ 2.31
PNKP-216ENST00000601816 CELF4Q9BZC1 486 aaKnown RBP29.45■■■□□ 2.31
PNKP-216ENST00000601816 TSPYL2Q9H2G4 693 aaPredicted RBP29.45■■■□□ 2.31
PNKP-216ENST00000601816 AGO3Q9H9G7 860 aaKnown RBP29.45■■■□□ 2.31
PNKP-216ENST00000601816 IGSF9BQ9UPX0 1349 aa29.45■■■□□ 2.3
PNKP-216ENST00000601816 COL4A4P53420 1690 aaPredicted RBP29.44■■■□□ 2.3
PNKP-216ENST00000601816 ZBTB42B2RXF5 422 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 CD52P31358 61 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 KRT40Q6A162 431 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 TRMT1LQ7Z2T5 733 aaKnown RBP29.44■■■□□ 2.3
PNKP-216ENST00000601816 FAM167AQ96KS9 214 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 PHF20Q9BVI0 1012 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 SUGCTQ9HAC7 445 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 DISC1Q9NRI5 854 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 KDM3AQ9Y4C1 1321 aa29.44■■■□□ 2.3
PNKP-216ENST00000601816 CYP3A7-CYP3A51PA0A087WV96 503 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 CHMP2AO43633 222 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 LPXNO60711 386 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 CTDNEP1O95476 244 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 CYP3A7P24462 503 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 SFNP31947 248 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 MOXD1Q6UVY6 613 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 ATXN2LQ8WWM7 1075 aaKnown RBP29.43■■■□□ 2.3
PNKP-216ENST00000601816 ORC3Q9UBD5 711 aaPredicted RBP29.43■■■□□ 2.3
PNKP-216ENST00000601816 CEP131Q9UPN4 1083 aa29.43■■■□□ 2.3
PNKP-216ENST00000601816 TRANK1O15050 2925 aa29.42■■■□□ 2.3
PNKP-216ENST00000601816 ENPP3O14638 875 aa29.42■■■□□ 2.3
PNKP-216ENST00000601816 JAK3P52333 1124 aa29.42■■■□□ 2.3
PNKP-216ENST00000601816 PAK2Q13177 524 aa29.42■■■□□ 2.3
PNKP-216ENST00000601816 SKIV2LQ15477 1246 aaKnown RBP29.42■■■□□ 2.3
PNKP-216ENST00000601816 TJAP1Q5JTD0 557 aa29.42■■■□□ 2.3
PNKP-216ENST00000601816 KIAA0319LQ8IZA0 1049 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms