RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ATXN2LQ8WWM7 1075 aaKnown RBP25.71■■□□□ 1.71
SSBP4-209ENST00000601357 UIMC1Q96RL1 719 aa25.71■■□□□ 1.71
SSBP4-209ENST00000601357 TGS1Q96RS0 853 aaKnown RBP25.71■■□□□ 1.71
SSBP4-209ENST00000601357 THEGQ9P2T0 379 aa25.71■■□□□ 1.71
SSBP4-209ENST00000601357 PRRC2BQ5JSZ5 2229 aaKnown RBP25.7■■□□□ 1.7
SSBP4-209ENST00000601357 M0R2N6 131 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 BACH1O14867 736 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 GTPBP6O43824 516 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-209ENST00000601357 USP11P51784 963 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 NLRP5P59047 1200 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 ANAPC15P60006 121 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 STK3Q13188 491 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 NPY5RQ15761 445 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 KRT40Q6A162 431 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 MIS18BP1Q6P0N0 1132 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 MTHFD1LQ6UB35 978 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 TSHZ1Q6ZSZ6 1077 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 SMAP1Q8IYB5 467 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-209ENST00000601357 FAM177A1Q8N128 213 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-209ENST00000601357 ATP8B4Q8TF62 1192 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 FAM49AQ9H0Q0 323 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-209ENST00000601357 ZNF302Q9NR11 478 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 PCDHA4Q9UN74 947 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 WDR81Q562E7 1941 aa25.7■■□□□ 1.7
SSBP4-209ENST00000601357 SMIM35A0A1B0GVV1 85 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 HBP1O60381 514 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 ATP4AP20648 1035 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 KRT76Q01546 638 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 TJAP1Q5JTD0 557 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 IER5Q5VY09 327 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 SWSAP1Q6NVH7 229 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 MICALL1Q8N3F8 863 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 DAGLBQ8NCG7 672 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 IL17RAQ96F46 866 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 SUGCTQ9HAC7 445 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 MAFBQ9Y5Q3 323 aaPredicted RBP25.69■■□□□ 1.7
SSBP4-209ENST00000601357 SQORQ9Y6N5 450 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 COL1A2P08123 1366 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 LOXHD1Q8IVV2 1947 aa25.69■■□□□ 1.7
SSBP4-209ENST00000601357 MYH9P35579 1960 aaKnown RBP25.68■■□□□ 1.7
SSBP4-209ENST00000601357 ZBTB42B2RXF5 422 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 SCRN1Q12765 414 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 PDXDC2PQ6P474 469 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 CPLX2Q6PUV4 134 aaKnown RBP25.68■■□□□ 1.7
SSBP4-209ENST00000601357 GDPD5Q8WTR4 605 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 AIFM3Q96NN9 605 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 AGO3Q9H9G7 860 aaKnown RBP25.68■■□□□ 1.7
SSBP4-209ENST00000601357 LMCD1Q9NZU5 365 aa25.68■■□□□ 1.7
SSBP4-209ENST00000601357 KDM3AQ9Y4C1 1321 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 KLRC1P26715 233 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 BLIDQ8IZY5 108 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 NME8Q8N427 588 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 ASB2Q96Q27 587 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 MTUS1Q9ULD2 1270 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 TPCN1Q9ULQ1 816 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 PCDHA10Q9Y5I2 948 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 TRPV2Q9Y5S1 764 aa25.67■■□□□ 1.7
SSBP4-209ENST00000601357 IGSF9BQ9UPX0 1349 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 MSH4O15457 936 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 UPP2O95045 317 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 ZNF484Q5JVG2 852 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 GALNT17Q6IS24 598 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 TBCKQ8TEA7 893 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 SYMPKQ92797 1274 aaKnown RBP25.66■■□□□ 1.7
SSBP4-209ENST00000601357 YME1L1Q96TA2 773 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 C17orf80Q9BSJ5 609 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 CELF4Q9BZC1 486 aaKnown RBP25.66■■□□□ 1.7
SSBP4-209ENST00000601357 C22orf23Q9BZE7 217 aa25.66■■□□□ 1.7
SSBP4-209ENST00000601357 ENPP3O14638 875 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 PFKFB2O60825 505 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 PSAPP07602 524 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 TMEM62Q0P6H9 643 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 BBXQ8WY36 941 aaPredicted RBP25.65■■□□□ 1.7
SSBP4-209ENST00000601357 SLC5A5Q92911 643 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 RIT2Q99578 217 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 RALGAPA2Q2PPJ7 1873 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 NLRC5Q86WI3 1866 aa25.65■■□□□ 1.7
SSBP4-209ENST00000601357 STK36Q9NRP7 1315 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 CYP3A7-CYP3A51PA0A087WV96 503 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 M0QZ92 97 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 CDKL5O76039 1030 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 CYP3A7P24462 503 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 CD52P31358 61 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 MRPS5P82675 430 aaKnown RBP25.64■■□□□ 1.7
SSBP4-209ENST00000601357 Q4G0T1 1027 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 KIAA0319LQ8IZA0 1049 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 LINC01599Q8WXQ3 324 aa25.64■■□□□ 1.7
SSBP4-209ENST00000601357 SLKQ9H2G2 1235 aaPredicted RBP25.64■■□□□ 1.7
SSBP4-209ENST00000601357 TSPYL2Q9H2G4 693 aaPredicted RBP25.64■■□□□ 1.7
SSBP4-209ENST00000601357 RC3H2Q9HBD1 1191 aaKnown RBP25.64■■□□□ 1.7
SSBP4-209ENST00000601357 TTC3P53804 2025 aa25.64■■□□□ 1.69
SSBP4-209ENST00000601357 WDR64B1ANS9 1081 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 C22orf31O95567 290 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 CRIPAKQ8N1N5 446 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 MBOAT7Q96N66 472 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 SAMD11Q96NU1 681 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 PHF20Q9BVI0 1012 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 GABBR1Q9UBS5 961 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 TCEAL9Q9UHQ7 104 aa25.63■■□□□ 1.69
SSBP4-209ENST00000601357 AK2P54819 239 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms