RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 KCNJ6P48051 423 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 JAK3P52333 1124 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 RABEP1Q15276 862 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 PPP4R3AQ6IN85 833 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 PDXDC2PQ6P474 469 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 RDM1Q8NG50 284 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 ETNPPLQ8TBG4 499 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 TNFRSF25Q93038 417 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 ZSCAN31Q96LW9 406 aaPredicted RBP19.44■□□□□ 0.7
HERC3-214ENST00000601319 NAP1L4Q99733 375 aaKnown RBP19.44■□□□□ 0.7
HERC3-214ENST00000601319 TEKT3Q9BXF9 490 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 UPF2Q9HAU5 1272 aaKnown RBP19.44■□□□□ 0.7
HERC3-214ENST00000601319 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 SH2B1Q9NRF2 756 aaPredicted RBP19.44■□□□□ 0.7
HERC3-214ENST00000601319 PCDHA2Q9Y5H9 948 aa19.44■□□□□ 0.7
HERC3-214ENST00000601319 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
HERC3-214ENST00000601319 DTNBO60941 627 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 PSMD10O75832 226 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 MMP1P03956 469 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 CTSHP09668 335 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 KRT2P35908 639 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 MGAT3Q09327 533 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 IKBKEQ14164 716 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 SWSAP1Q6NVH7 229 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 B3GNT9Q6UX72 402 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 HERC6Q8IVU3 1022 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 OXER1Q8TDS5 423 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 FAM161BQ96MY7 647 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 UIMC1Q96RL1 719 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 ZNF576Q9H609 170 aa19.43■□□□□ 0.7
HERC3-214ENST00000601319 DDX25Q9UHL0 483 aaKnown RBP19.43■□□□□ 0.7
HERC3-214ENST00000601319 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
HERC3-214ENST00000601319 IGBP1P78318 339 aa19.42■□□□□ 0.7
HERC3-214ENST00000601319 BBXQ8WY36 941 aaPredicted RBP19.42■□□□□ 0.7
HERC3-214ENST00000601319 FAM167AQ96KS9 214 aa19.42■□□□□ 0.7
HERC3-214ENST00000601319 CDX2Q99626 313 aaPredicted RBP19.42■□□□□ 0.7
HERC3-214ENST00000601319 DISC1Q9NRI5 854 aa19.42■□□□□ 0.7
HERC3-214ENST00000601319 SMIM35A0A1B0GVV1 85 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 ZBTB42B2RXF5 422 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 SLC37A4O43826 429 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 CHRNA1P02708 482 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 ATP4AP20648 1035 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 MRPS6P82932 125 aaKnown RBP19.41■□□□□ 0.7
HERC3-214ENST00000601319 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
HERC3-214ENST00000601319 TRIM29Q14134 588 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 LETM2Q2VYF4 491 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 ZNF484Q5JVG2 852 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 MTHFD1LQ6UB35 978 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 PIK3AP1Q6ZUJ8 805 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 CCDC83Q8IWF9 413 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 DBF4BQ8NFT6 615 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 TRAPPC12Q8WVT3 735 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 DNAJB3Q8WWF6 145 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 SEPT8Q92599 483 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 APBB2Q92870 758 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 FAM20AQ96MK3 541 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 UNC45AQ9H3U1 944 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 SLC28A3Q9HAS3 691 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 KCNMB3Q9NPA1 279 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 SAMM50Q9Y512 469 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 RALGAPA2Q2PPJ7 1873 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 NLRC5Q86WI3 1866 aa19.41■□□□□ 0.7
HERC3-214ENST00000601319 TBX3O15119 743 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 RABGGTBP53611 331 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 HMGN5P82970 282 aaKnown RBP19.4■□□□□ 0.7
HERC3-214ENST00000601319 NR5A1Q13285 461 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 KRT40Q6A162 431 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 NKX2-4Q9H2Z4 354 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 GABBR1Q9UBS5 961 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 CEP131Q9UPN4 1083 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 SQORQ9Y6N5 450 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 KDM3AQ9Y4C1 1321 aa19.4■□□□□ 0.7
HERC3-214ENST00000601319 DEFB103AP81534 67 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 EARS2Q5JPH6 523 aaKnown RBP19.39■□□□□ 0.69
HERC3-214ENST00000601319 IER5Q5VY09 327 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 DIS3L2Q8IYB7 885 aaKnown RBP19.39■□□□□ 0.69
HERC3-214ENST00000601319 NME8Q8N427 588 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 ZBTB10Q96DT7 871 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 IFIH1Q9BYX4 1025 aaKnown RBP19.39■□□□□ 0.69
HERC3-214ENST00000601319 CDY2AQ9Y6F7 541 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 MYO9BQ13459 2157 aa19.39■□□□□ 0.69
HERC3-214ENST00000601319 KIF28PB7ZC32 967 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 CHMP2AO43633 222 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 ST18O60284 1047 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 ZNF862O60290 1169 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 CCNT1O60563 726 aaKnown RBP19.38■□□□□ 0.69
HERC3-214ENST00000601319 REV3LO60673 3130 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 C22orf31O95567 290 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 OATP04181 439 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 KLRC1P26715 233 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 PPP2R5CQ13362 524 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 FBXO47Q5MNV8 452 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 PPP2R2DQ66LE6 453 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 TSHZ1Q6ZSZ6 1077 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 PRUNE2Q8WUY3 3088 aa19.38■□□□□ 0.69
HERC3-214ENST00000601319 MYLIPQ8WY64 445 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms