RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TRAPPC12Q8WVT3 735 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 BRF1Q92994 677 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 ZNF689Q96CS4 500 aaPredicted RBP19.34■□□□□ 0.69
SCAF1-204ENST00000601038 FTHL17Q9BXU8 183 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 CELF4Q9BZC1 486 aaKnown RBP19.34■□□□□ 0.69
SCAF1-204ENST00000601038 RC3H2Q9HBD1 1191 aaKnown RBP19.34■□□□□ 0.69
SCAF1-204ENST00000601038 RWDD3Q9Y3V2 267 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 SNX14Q9Y5W7 946 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 XIRP2A4UGR9 3374 aa19.33■□□□□ 0.69
SCAF1-204ENST00000601038 ADGRA3Q8IWK6 1321 aa19.33■□□□□ 0.69
SCAF1-204ENST00000601038 IGLV3-22A0A075B6J6 115 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 SMIM35A0A1B0GVV1 85 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 DDX39AO00148 427 aaKnown RBP19.33■□□□□ 0.68
SCAF1-204ENST00000601038 DHX15O43143 795 aaKnown RBP19.33■□□□□ 0.68
SCAF1-204ENST00000601038 PRPF3O43395 683 aaKnown RBP19.33■□□□□ 0.68
SCAF1-204ENST00000601038 HBP1O60381 514 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 LINC00271P0C7V0 271 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 KCNA5P22460 613 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 CD52P31358 61 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 BMPR1AP36894 532 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 PKN1Q16512 942 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 FAM160B1Q5W0V3 765 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 MTHFD1LQ6UB35 978 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 CLP1Q92989 425 aaKnown RBP19.33■□□□□ 0.68
SCAF1-204ENST00000601038 C1QTNF1Q9BXJ1 281 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 NLRC5Q86WI3 1866 aa19.33■□□□□ 0.68
SCAF1-204ENST00000601038 NID2Q14112 1375 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 IGSF9BQ9UPX0 1349 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 KDM3AQ9Y4C1 1321 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 IPO5O00410 1097 aaKnown RBP19.32■□□□□ 0.68
SCAF1-204ENST00000601038 BACH1O14867 736 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 DGKIO75912 1065 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 KLRC1P26715 233 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 GNA11P29992 359 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 CTNNB1P35222 781 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 TMEM62Q0P6H9 643 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 RTN4RL1Q86UN2 441 aaPredicted RBP19.32■□□□□ 0.68
SCAF1-204ENST00000601038 CRIPAKQ8N1N5 446 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.32■□□□□ 0.68
SCAF1-204ENST00000601038 ATP8B4Q8TF62 1192 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 LINC01599Q8WXQ3 324 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 C11orf84Q9BUA3 381 aaPredicted RBP19.32■□□□□ 0.68
SCAF1-204ENST00000601038 AGXT2Q9BYV1 514 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 NSUN3Q9H649 340 aaKnown RBP19.32■□□□□ 0.68
SCAF1-204ENST00000601038 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 RALGAPA2Q2PPJ7 1873 aa19.32■□□□□ 0.68
SCAF1-204ENST00000601038 KRT76Q01546 638 aa19.31■□□□□ 0.68
SCAF1-204ENST00000601038 BTG3Q14201 252 aaPredicted RBP19.31■□□□□ 0.68
SCAF1-204ENST00000601038 TCEAL5Q5H9L2 206 aa19.31■□□□□ 0.68
SCAF1-204ENST00000601038 MIS18BP1Q6P0N0 1132 aa19.31■□□□□ 0.68
SCAF1-204ENST00000601038 FAM43BQ6ZT52 329 aaPredicted RBP19.31■□□□□ 0.68
SCAF1-204ENST00000601038 REXO1Q8N1G1 1221 aaKnown RBP19.31■□□□□ 0.68
SCAF1-204ENST00000601038 ZNF302Q9NR11 478 aa19.31■□□□□ 0.68
SCAF1-204ENST00000601038 TBC1D22BQ9NU19 505 aa19.31■□□□□ 0.68
SCAF1-204ENST00000601038 ADAMTS3O15072 1205 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 REC8O95072 547 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PSMA5P28066 241 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 SETQ01105 290 aaPredicted RBP19.3■□□□□ 0.68
SCAF1-204ENST00000601038 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PAK2Q13177 524 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 COL19A1Q14993 1142 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 NTRK3Q16288 839 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PUS10Q3MIT2 529 aaKnown RBP19.3■□□□□ 0.68
SCAF1-204ENST00000601038 ZNF484Q5JVG2 852 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 SWSAP1Q6NVH7 229 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PDXDC2PQ6P474 469 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 NPAS4Q8IUM7 802 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 CCDC60Q8IWA6 550 aaPredicted RBP19.3■□□□□ 0.68
SCAF1-204ENST00000601038 NEK9Q8TD19 979 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PABPC5Q96DU9 382 aaKnown RBP19.3■□□□□ 0.68
SCAF1-204ENST00000601038 ZNF577Q9BSK1 485 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 PLVAPQ9BX97 442 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 LMAN2LQ9H0V9 348 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 COL1A2P08123 1366 aa19.3■□□□□ 0.68
SCAF1-204ENST00000601038 STAG3L1P0CL83 205 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 ZNF746Q6NUN9 644 aaPredicted RBP19.29■□□□□ 0.68
SCAF1-204ENST00000601038 CMTR2Q8IYT2 770 aaKnown RBP19.29■□□□□ 0.68
SCAF1-204ENST00000601038 KIAA0319LQ8IZA0 1049 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 PHKBQ93100 1093 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 RNF26Q9BY78 433 aaPredicted RBP19.29■□□□□ 0.68
SCAF1-204ENST00000601038 EPHX3Q9H6B9 360 aa19.29■□□□□ 0.68
SCAF1-204ENST00000601038 MYO7AQ13402 2215 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 LOXHD1Q8IVV2 1947 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 GRXCR2A6NFK2 248 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 ZBTB42B2RXF5 422 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 GRM6O15303 877 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 NCK2O43639 380 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 ATP4AP20648 1035 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 CIITAP33076 1130 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 EVCP57679 992 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 PTCRAQ6ISU1 281 aaPredicted RBP19.28■□□□□ 0.68
SCAF1-204ENST00000601038 FAM178BQ8IXR5 827 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 SMAP1Q8IYB5 467 aaPredicted RBP19.28■□□□□ 0.68
SCAF1-204ENST00000601038 CCDC148Q8NFR7 591 aa19.28■□□□□ 0.68
SCAF1-204ENST00000601038 BBXQ8WY36 941 aaPredicted RBP19.28■□□□□ 0.68
SCAF1-204ENST00000601038 UIMC1Q96RL1 719 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms