RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 PPM1EQ8WY54 764 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
IRF3-226ENST00000600453 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 TPCN1Q9ULQ1 816 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 CEP131Q9UPN4 1083 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 MAFBQ9Y5Q3 323 aaPredicted RBP17.71■□□□□ 0.43
IRF3-226ENST00000600453 STK36Q9NRP7 1315 aa17.71■□□□□ 0.42
IRF3-226ENST00000600453 CYP3A7-CYP3A51PA0A087WV96 503 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 WDR64B1ANS9 1081 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 CYP3A7P24462 503 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 KLRC1P26715 233 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 SFNP31947 248 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 MGAT3Q09327 533 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
IRF3-226ENST00000600453 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
IRF3-226ENST00000600453 ODR4Q5SWX8 454 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 FAM117BQ6P1L5 589 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 TSHZ1Q6ZSZ6 1077 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 CCDC60Q8IWA6 550 aaPredicted RBP17.7■□□□□ 0.42
IRF3-226ENST00000600453 SYMPKQ92797 1274 aaKnown RBP17.7■□□□□ 0.42
IRF3-226ENST00000600453 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 FAM49AQ9H0Q0 323 aaPredicted RBP17.7■□□□□ 0.42
IRF3-226ENST00000600453 CERS4Q9HA82 394 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 CDY2AQ9Y6F7 541 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 MICAL3Q7RTP6 2002 aa17.7■□□□□ 0.42
IRF3-226ENST00000600453 MSH4O15457 936 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 MAGEB2O15479 319 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 GAS7O60861 476 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 GHRP10912 638 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 NEK4P51957 841 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 JAK3P52333 1124 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 AK2P54819 239 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 ERVK-21P61565 698 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 HTRA4P83105 476 aaPredicted RBP17.69■□□□□ 0.42
IRF3-226ENST00000600453 LPIN1Q14693 890 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 TMCO2Q7Z6W1 182 aaPredicted RBP17.69■□□□□ 0.42
IRF3-226ENST00000600453 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 RDM1Q8NG50 284 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 LENG9Q96B70 501 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
IRF3-226ENST00000600453 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
IRF3-226ENST00000600453 DISC1Q9NRI5 854 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 TRPV2Q9Y5S1 764 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 KDM3AQ9Y4C1 1321 aa17.69■□□□□ 0.42
IRF3-226ENST00000600453 CCDC194A0A1B0GVG4 234 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 M0R2N6 131 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 CCDC85BQ15834 202 aaPredicted RBP17.68■□□□□ 0.42
IRF3-226ENST00000600453 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
IRF3-226ENST00000600453 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 YME1L1Q96TA2 773 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 PHF20Q9BVI0 1012 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
IRF3-226ENST00000600453 GABBR1Q9UBS5 961 aa17.68■□□□□ 0.42
IRF3-226ENST00000600453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.67■□□□□ 0.42
IRF3-226ENST00000600453 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 LINC01553A4QN01 128 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 ENPP3O14638 875 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 UPP2O95045 317 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 TMOD1P28289 359 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 TRAPPC12Q8WVT3 735 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 UIMC1Q96RL1 719 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 BRMS1Q9HCU9 246 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 ORC3Q9UBD5 711 aaPredicted RBP17.67■□□□□ 0.42
IRF3-226ENST00000600453 MTCH2Q9Y6C9 303 aa17.67■□□□□ 0.42
IRF3-226ENST00000600453 PTPRSQ13332 1948 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 PRRC2BQ5JSZ5 2229 aaKnown RBP17.66■□□□□ 0.42
IRF3-226ENST00000600453 RFXAPO00287 272 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 EDIL3O43854 480 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 GCFC2P16383 781 aaKnown RBP17.66■□□□□ 0.42
IRF3-226ENST00000600453 ATP4AP20648 1035 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 KIAA0319LQ8IZA0 1049 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 SP7Q8TDD2 431 aaPredicted RBP17.66■□□□□ 0.42
IRF3-226ENST00000600453 MBOAT7Q96N66 472 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 OSBPL7Q9BZF2 842 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 THEGQ9P2T0 379 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 IGSF9BQ9UPX0 1349 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 CDH23Q9H251 3354 aa17.66■□□□□ 0.42
IRF3-226ENST00000600453 EVPLQ92817 2033 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 PSMD10O75832 226 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 PAK2Q13177 524 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 GRB10Q13322 594 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 NPY5RQ15761 445 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 ME3Q16798 604 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 INF2Q27J81 1249 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 PPP4R3AQ6IN85 833 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 MIER3Q7Z3K6 550 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 NEK8Q86SG6 692 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 MICALL1Q8N3F8 863 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 METTL13Q8N6R0 699 aa17.65■□□□□ 0.42
IRF3-226ENST00000600453 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms