RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 GOLGA8BA8MQT2 603 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 PI4K2BG5E9Z4 385 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 DDX39AO00148 427 aaKnown RBP16.75■□□□□ 0.27
IRF3-223ENST00000599223 CPA1P15085 419 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.274e-10■■■■■ 32.8
IRF3-223ENST00000599223 GATMP50440 423 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 DLX2Q07687 328 aaPredicted RBP16.75■□□□□ 0.27
IRF3-223ENST00000599223 HYAL1Q12794 435 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 CAMK1Q14012 370 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 BTG3Q14201 252 aaPredicted RBP16.75■□□□□ 0.27
IRF3-223ENST00000599223 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
IRF3-223ENST00000599223 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
IRF3-223ENST00000599223 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 AZI2Q9H6S1 392 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 CLDND1Q9NY35 253 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 PCDHA2Q9Y5H9 948 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 MUC6Q6W4X9 2439 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 IGKV6D-21A0A0A0MT36 114 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 FAM86B1E9PN63 330 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 MEIS1O00470 390 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 TBX10O75333 385 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 FAM86B2P0C5J1 330 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 STAT5BP51692 787 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 TMEM266Q2M3C6 531 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 EP400NLQ6ZTU2 488 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 CCDC60Q8IWA6 550 aaPredicted RBP16.74■□□□□ 0.27
IRF3-223ENST00000599223 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 PADI3Q9ULW8 664 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 WDFY4Q6ZS81 3184 aa16.74■□□□□ 0.27
IRF3-223ENST00000599223 IGLV3-22A0A075B6J6 115 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 GPR37L1O60883 481 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 ATG7O95352 703 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 MMP1P03956 469 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 RB1P06400 928 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 DNAJB1P25685 340 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
IRF3-223ENST00000599223 ZP2Q05996 745 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 CLUL1Q15846 466 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 CTC1Q2NKJ3 1217 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 PAN2Q504Q3 1202 aaKnown RBP16.73■□□□□ 0.27
IRF3-223ENST00000599223 IER5Q5VY09 327 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 TMEM40Q8WWA1 233 aa16.73■□□□□ 0.27
IRF3-223ENST00000599223 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
IRF3-223ENST00000599223 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 LINC01565O15544 149 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 DHX15O43143 795 aaKnown RBP16.72■□□□□ 0.27
IRF3-223ENST00000599223 MGEA5O60502 916 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
IRF3-223ENST00000599223 PAK2Q13177 524 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 ABHD15Q6UXT9 468 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 NPAS4Q8IUM7 802 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 CMTR2Q8IYT2 770 aaKnown RBP16.72■□□□□ 0.27
IRF3-223ENST00000599223 FAM122AQ96E09 287 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
IRF3-223ENST00000599223 LMAN2LQ9H0V9 348 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 CDHR5Q9HBB8 845 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 PLAGL2Q9UPG8 496 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 RWDD3Q9Y3V2 267 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 SQORQ9Y6N5 450 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 NID2Q14112 1375 aa16.72■□□□□ 0.27
IRF3-223ENST00000599223 SMIM35A0A1B0GVV1 85 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 M0QZ92 97 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 RPLP2P05387 115 aaKnown RBP16.71■□□□□ 0.27
IRF3-223ENST00000599223 ITGB1P05556 798 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 SCG2P13521 617 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 ATP4AP20648 1035 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
IRF3-223ENST00000599223 KRT76Q01546 638 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 PFKFB3Q16875 520 aaPredicted RBP16.71■□□□□ 0.27
IRF3-223ENST00000599223 NIPA1Q7RTP0 329 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 ADGRD2Q7Z7M1 963 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 TEX2Q8IWB9 1127 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
IRF3-223ENST00000599223 ATP8B4Q8TF62 1192 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 PPP1R16BQ96T49 567 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 HCSTQ9UBK5 93 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 PCDHGC5Q9Y5F6 944 aa16.71■□□□□ 0.27
IRF3-223ENST00000599223 BACH1O14867 736 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 CDC45O75419 566 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 IBSPP21815 317 aaPredicted RBP16.7■□□□□ 0.26
IRF3-223ENST00000599223 KLRC1P26715 233 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 IRS1P35568 1242 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 RCAN1P53805 252 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 APOBRQ0VD83 1088 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms