RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 LPIN1Q14693 890 aa26.64■■□□□ 1.86
LSM4-204ENST00000594828 TJAP1Q5JTD0 557 aa26.64■■□□□ 1.86
LSM4-204ENST00000594828 SWSAP1Q6NVH7 229 aa26.64■■□□□ 1.86
LSM4-204ENST00000594828 CCDC60Q8IWA6 550 aaPredicted RBP26.64■■□□□ 1.86
LSM4-204ENST00000594828 HBP1O60381 514 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 USP11P51784 963 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 FBXO47Q5MNV8 452 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 KRT40Q6A162 431 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 ZNF746Q6NUN9 644 aaPredicted RBP26.63■■□□□ 1.85
LSM4-204ENST00000594828 PDXDC2PQ6P474 469 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 ATP8B4Q8TF62 1192 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 TCEAL9Q9UHQ7 104 aa26.63■■□□□ 1.85
LSM4-204ENST00000594828 M0QZ92 97 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 LPXNO60711 386 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 MTHFD1LQ6UB35 978 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 SMAP1Q8IYB5 467 aaPredicted RBP26.62■■□□□ 1.85
LSM4-204ENST00000594828 YME1L1Q96TA2 773 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 SUGCTQ9HAC7 445 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 PCDHA4Q9UN74 947 aa26.62■■□□□ 1.85
LSM4-204ENST00000594828 SMIM35A0A1B0GVV1 85 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 KLRC1P26715 233 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 KRT76Q01546 638 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 TMEM62Q0P6H9 643 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 SKIV2LQ15477 1246 aaKnown RBP26.61■■□□□ 1.85
LSM4-204ENST00000594828 TSHZ1Q6ZSZ6 1077 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 NME8Q8N427 588 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 SP7Q8TDD2 431 aaPredicted RBP26.61■■□□□ 1.85
LSM4-204ENST00000594828 LENG9Q96B70 501 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 C22orf23Q9BZE7 217 aa26.61■■□□□ 1.85
LSM4-204ENST00000594828 EDIL3O43854 480 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 PSAPP07602 524 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 MRPS5P82675 430 aaKnown RBP26.6■■□□□ 1.85
LSM4-204ENST00000594828 ZNF484Q5JVG2 852 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 CKAP2LQ8IYA6 745 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 GDPD5Q8WTR4 605 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 ASB2Q96Q27 587 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 LMCD1Q9NZU5 365 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 PCDHA10Q9Y5I2 948 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 MAFBQ9Y5Q3 323 aaPredicted RBP26.6■■□□□ 1.85
LSM4-204ENST00000594828 TRPV2Q9Y5S1 764 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 SQORQ9Y6N5 450 aa26.6■■□□□ 1.85
LSM4-204ENST00000594828 ENPP3O14638 875 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 ATP4AP20648 1035 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 ANAPC15P60006 121 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 BLIDQ8IZY5 108 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 FAM177A1Q8N128 213 aaPredicted RBP26.59■■□□□ 1.85
LSM4-204ENST00000594828 TBCKQ8TEA7 893 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 C17orf80Q9BSJ5 609 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 CELF4Q9BZC1 486 aaKnown RBP26.59■■□□□ 1.85
LSM4-204ENST00000594828 SLKQ9H2G2 1235 aaPredicted RBP26.59■■□□□ 1.85
LSM4-204ENST00000594828 AGO3Q9H9G7 860 aaKnown RBP26.59■■□□□ 1.85
LSM4-204ENST00000594828 SAMM50Q9Y512 469 aa26.59■■□□□ 1.85
LSM4-204ENST00000594828 COL1A2P08123 1366 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 CDKL5O76039 1030 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 CD52P31358 61 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 SCRN1Q12765 414 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 GALNT17Q6IS24 598 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 BBXQ8WY36 941 aaPredicted RBP26.58■■□□□ 1.85
LSM4-204ENST00000594828 AIFM3Q96NN9 605 aa26.58■■□□□ 1.85
LSM4-204ENST00000594828 SIP14410 1827 aa26.58■■□□□ 1.84
LSM4-204ENST00000594828 MSH4O15457 936 aa26.57■■□□□ 1.84
LSM4-204ENST00000594828 TRMT1LQ7Z2T5 733 aaKnown RBP26.57■■□□□ 1.84
LSM4-204ENST00000594828 DAGLBQ8NCG7 672 aa26.57■■□□□ 1.84
LSM4-204ENST00000594828 FBXO22Q8NEZ5 403 aa26.57■■□□□ 1.84
LSM4-204ENST00000594828 GABBR1Q9UBS5 961 aa26.57■■□□□ 1.84
LSM4-204ENST00000594828 IL17RAQ96F46 866 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 SAMD11Q96NU1 681 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 RIT2Q99578 217 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 TPCN1Q9ULQ1 816 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 IGSF9BQ9UPX0 1349 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 KDM3AQ9Y4C1 1321 aa26.56■■□□□ 1.84
LSM4-204ENST00000594828 PRRC2BQ5JSZ5 2229 aaKnown RBP26.55■■□□□ 1.84
LSM4-204ENST00000594828 WDR64B1ANS9 1081 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 ZBTB42B2RXF5 422 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 M0R2N6 131 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 PFKFB2O60825 505 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 ANKRD1Q15327 319 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 EPC2Q52LR7 807 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 KIAA0319LQ8IZA0 1049 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 SLC5A5Q92911 643 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 FTHL17Q9BXU8 183 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 DISC1Q9NRI5 854 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 PADI3Q9ULW8 664 aa26.55■■□□□ 1.84
LSM4-204ENST00000594828 GAS7O60861 476 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 PAK2Q13177 524 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 NPY5RQ15761 445 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 Q4G0T1 1027 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 LRCH2Q5VUJ6 765 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 IL27Q8NEV9 243 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 TEKT3Q9BXF9 490 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 KCNJ14Q9UNX9 436 aa26.54■■□□□ 1.84
LSM4-204ENST00000594828 COL4A4P53420 1690 aaPredicted RBP26.54■■□□□ 1.84
LSM4-204ENST00000594828 TRANK1O15050 2925 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 CYP3A7-CYP3A51PA0A087WV96 503 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 EIF5BO60841 1220 aaKnown RBP26.53■■□□□ 1.84
LSM4-204ENST00000594828 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
LSM4-204ENST00000594828 CYP3A7P24462 503 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 TFF2Q03403 129 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 AAK1Q2M2I8 961 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 RTN4RL1Q86UN2 441 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms