RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 UPF2Q9HAU5 1272 aaKnown RBP14.23□□□□□ -0.13
UPF1-203ENST00000594504 AGO4Q9HCK5 861 aaKnown RBP14.23□□□□□ -0.13
UPF1-203ENST00000594504 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
UPF1-203ENST00000594504 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
UPF1-203ENST00000594504 PDIA3P30101 505 aaKnown RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 ADD1P35611 737 aaKnown RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 CLK2P49760 499 aaKnown RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 ADCY7P51828 1080 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 ANKRD1Q15327 319 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 JAKMIP3Q5VZ66 844 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 TSHZ1Q6ZSZ6 1077 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 ZNF274Q96GC6 653 aaPredicted RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 NSUN3Q9H649 340 aaKnown RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 RC3H2Q9HBD1 1191 aaKnown RBP14.22□□□□□ -0.13
UPF1-203ENST00000594504 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
UPF1-203ENST00000594504 NFASCO94856 1347 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 ADGRA3Q8IWK6 1321 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 GRXCR2A6NFK2 248 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 C5orf67F2Z3F1 127 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 PI4K2BG5E9Z4 385 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 MEIS1O00470 390 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 DGKIO75912 1065 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 ATG7O95352 703 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 CCNE2O96020 404 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 FOSP01100 380 aaPredicted RBP14.21□□□□□ -0.13
UPF1-203ENST00000594504 IBSPP21815 317 aaPredicted RBP14.21□□□□□ -0.13
UPF1-203ENST00000594504 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
UPF1-203ENST00000594504 ZNF76P36508 570 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 GATMP50440 423 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 BTG3Q14201 252 aaPredicted RBP14.21□□□□□ -0.13
UPF1-203ENST00000594504 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 TIGD5Q53EQ6 642 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 IER5Q5VY09 327 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 MTHFD1LQ6UB35 978 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 PLPPR4Q7Z2D5 763 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 GJD3Q8N144 294 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 C22orf23Q9BZE7 217 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 ALG13Q9NP73 1137 aaKnown RBP14.21□□□□□ -0.13
UPF1-203ENST00000594504 CLDND1Q9NY35 253 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 BARHL2Q9NY43 387 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 PADI3Q9ULW8 664 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 PCDHA2Q9Y5H9 948 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.13
UPF1-203ENST00000594504 TTC3P53804 2025 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 FAM86B1E9PN63 330 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 RB1P06400 928 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 FAM86B2P0C5J1 330 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 KLRC1P26715 233 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 LTBRP36941 435 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 NEK4P51957 841 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 DLX2Q07687 328 aaPredicted RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 PAN2Q504Q3 1202 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 TMEM31Q5JXX7 168 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 TRMT1LQ7Z2T5 733 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 PLA2G4DQ86XP0 818 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 CRIPAKQ8N1N5 446 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 PABPC5Q96DU9 382 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 TMX1Q9H3N1 280 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 IGFLR1Q9H665 355 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 MRPL42Q9Y6G3 142 aaKnown RBP14.2□□□□□ -0.14
UPF1-203ENST00000594504 XIRP2A4UGR9 3374 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
UPF1-203ENST00000594504 IGKV6D-21A0A0A0MT36 114 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 hCG_1984214I3L0E3 225 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 M0QZ92 97 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 DHX15O43143 795 aaKnown RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 ATP4AP20648 1035 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 SREBF1P36956 1147 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 AK2P54819 239 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 HYAL1Q12794 435 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 NFX1Q12986 1120 aaKnown RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 CAMK1Q14012 370 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 CLUL1Q15846 466 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 SWSAP1Q6NVH7 229 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 PPP1R18Q6NYC8 613 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 ABHD15Q6UXT9 468 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 CCDC60Q8IWA6 550 aaPredicted RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 ZNF713Q8N859 430 aaPredicted RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 CLP1Q92989 425 aaKnown RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 PPP1R16BQ96T49 567 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 LARP6Q9BRS8 491 aaKnown RBP14.19□□□□□ -0.14
UPF1-203ENST00000594504 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 MUC3AQ02505 3323 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 EVPLQ92817 2033 aa14.19□□□□□ -0.14
UPF1-203ENST00000594504 KIAA1671Q9BY89 1806 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 SMIM35A0A1B0GVV1 85 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 BACH1O14867 736 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 LINC01565O15544 149 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 MGEA5O60502 916 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 IFNAR1P17181 557 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 DNAJB1P25685 340 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms