RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 FAM49AQ9H0Q0 323 aaPredicted RBP19.61■□□□□ 0.73
IRF3-208ENST00000594387 NRBP2Q9NSY0 501 aa19.61■□□□□ 0.73
IRF3-208ENST00000594387 DDX25Q9UHL0 483 aaKnown RBP19.61■□□□□ 0.73
IRF3-208ENST00000594387 CEP131Q9UPN4 1083 aa19.61■□□□□ 0.73
IRF3-208ENST00000594387 PCDHA2Q9Y5H9 948 aa19.61■□□□□ 0.73
IRF3-208ENST00000594387 CYP3A7-CYP3A51PA0A087WV96 503 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 M0R2N6 131 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 GCFC2P16383 781 aaKnown RBP19.6■□□□□ 0.73
IRF3-208ENST00000594387 CYP3A7P24462 503 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 PLEKHG4Q58EX7 1191 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 RUFY4Q6ZNE9 571 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 PIK3AP1Q6ZUJ8 805 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 MIER3Q7Z3K6 550 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 CCDC60Q8IWA6 550 aaPredicted RBP19.6■□□□□ 0.73
IRF3-208ENST00000594387 NME8Q8N427 588 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 IL27Q8NEV9 243 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 SLC5A5Q92911 643 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 LENG9Q96B70 501 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 DISC1Q9NRI5 854 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 GABBR1Q9UBS5 961 aa19.6■□□□□ 0.73
IRF3-208ENST00000594387 CHMP2AO43633 222 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 LARGE1O95461 756 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 MBTPS1Q14703 1052 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 GRIN2CQ14957 1233 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 SAFBQ15424 915 aaKnown RBP eCLIP19.59■□□□□ 0.73
IRF3-208ENST00000594387 MARCH8Q5T0T0 291 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 MTHFD1LQ6UB35 978 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
IRF3-208ENST00000594387 NSUN7Q8NE18 718 aaKnown RBP19.59■□□□□ 0.73
IRF3-208ENST00000594387 RDM1Q8NG50 284 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 SH2B1Q9NRF2 756 aaPredicted RBP19.59■□□□□ 0.73
IRF3-208ENST00000594387 YBX2Q9Y2T7 364 aaKnown RBP19.59■□□□□ 0.73
IRF3-208ENST00000594387 MAFBQ9Y5Q3 323 aaPredicted RBP19.59■□□□□ 0.73
IRF3-208ENST00000594387 SIP14410 1827 aa19.59■□□□□ 0.73
IRF3-208ENST00000594387 SMIM35A0A1B0GVV1 85 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 ST18O60284 1047 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 CCNT1O60563 726 aaKnown RBP19.58■□□□□ 0.72
IRF3-208ENST00000594387 BAG4O95429 457 aaKnown RBP19.58■□□□□ 0.72
IRF3-208ENST00000594387 TDP2O95551 362 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 KLRC1P26715 233 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 MRPS6P82932 125 aaKnown RBP19.58■□□□□ 0.72
IRF3-208ENST00000594387 NPY5RQ15761 445 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 SLC17A8Q8NDX2 589 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 TRAPPC12Q8WVT3 735 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 LLPHQ9BRT6 129 aaKnown RBP19.58■□□□□ 0.72
IRF3-208ENST00000594387 IFIH1Q9BYX4 1025 aaKnown RBP19.58■□□□□ 0.72
IRF3-208ENST00000594387 CDY2AQ9Y6F7 541 aa19.58■□□□□ 0.72
IRF3-208ENST00000594387 CHRNA1P02708 482 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 CA3P07451 260 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 FDPSP14324 419 aaKnown RBP19.57■□□□□ 0.72
IRF3-208ENST00000594387 MYOGP15173 224 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 RABEP1Q15276 862 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 PPP4R3AQ6IN85 833 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 CCDC83Q8IWF9 413 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 MYOCDQ8IZQ8 938 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 USP38Q8NB14 1042 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 FAM20AQ96MK3 541 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 PRDM12Q9H4Q4 367 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 GJB4Q9NTQ9 266 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 TRPV2Q9Y5S1 764 aa19.57■□□□□ 0.72
IRF3-208ENST00000594387 MAGEB2O15479 319 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 DTNBO60941 627 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 GHRP10912 638 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 TMOD1P28289 359 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 RBM25P49756 843 aaKnown RBP19.56■□□□□ 0.72
IRF3-208ENST00000594387 FOSBP53539 338 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 DEFB103AP81534 67 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
IRF3-208ENST00000594387 ODR4Q5SWX8 454 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 MAFAQ8NHW3 353 aaPredicted RBP19.56■□□□□ 0.72
IRF3-208ENST00000594387 MBOAT7Q96N66 472 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 RAD9AQ99638 391 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 UNC45AQ9H3U1 944 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 SQORQ9Y6N5 450 aa19.56■□□□□ 0.72
IRF3-208ENST00000594387 EDIL3O43854 480 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 JAK2O60674 1132 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 DKC1O60832 514 aaKnown RBP eCLIP19.55■□□□□ 0.72
IRF3-208ENST00000594387 PSMD10O75832 226 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 GJB5O95377 273 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 MMP1P03956 469 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 IGFBP4P22692 258 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 TMEM62Q0P6H9 643 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 GNL2Q13823 731 aaKnown RBP19.55■□□□□ 0.72
IRF3-208ENST00000594387 KRT40Q6A162 431 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 METTL13Q8N6R0 699 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 OXER1Q8TDS5 423 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 C8orf76Q96K31 380 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 CELF4Q9BZC1 486 aaKnown RBP19.55■□□□□ 0.72
IRF3-208ENST00000594387 INSL6Q9Y581 213 aa19.55■□□□□ 0.72
IRF3-208ENST00000594387 TBX3O15119 743 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 OATP04181 439 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 MGAT3Q09327 533 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 FBXO47Q5MNV8 452 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.54■□□□□ 0.72
IRF3-208ENST00000594387 TSHZ1Q6ZSZ6 1077 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 SLFN12Q8IYM2 578 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 GINS2Q9Y248 185 aa19.54■□□□□ 0.72
IRF3-208ENST00000594387 IGSF9BQ9UPX0 1349 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms