RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TRAPPC12Q8WVT3 735 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 PPP2R3CQ969Q6 453 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 POP1Q99575 1024 aaKnown RBP16.82■□□□□ 0.28
PNKP-202ENST00000593706 MXRA8Q9BRK3 442 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 ALG13Q9NP73 1137 aaKnown RBP16.82■□□□□ 0.28
PNKP-202ENST00000593706 MRPL42Q9Y6G3 142 aaKnown RBP16.82■□□□□ 0.28
PNKP-202ENST00000593706 NFASCO94856 1347 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 LTBRP36941 435 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 ADCY7P51828 1080 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 PLCB4Q15147 1175 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 CTC1Q2NKJ3 1217 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
PNKP-202ENST00000593706 KCNB2Q92953 911 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 PCYT2Q99447 389 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
PNKP-202ENST00000593706 LRFN2Q9ULH4 789 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 PADI3Q9ULW8 664 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
PNKP-202ENST00000593706 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 TBX10O75333 385 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 NEFLP07196 543 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 STAG3L1P0CL83 205 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 SCG2P13521 617 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 NDUFV1P49821 464 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 STAT5BP51692 787 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
PNKP-202ENST00000593706 SMAD2Q15796 467 aaKnown RBP16.8■□□□□ 0.28
PNKP-202ENST00000593706 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 P2RX5Q93086 422 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
PNKP-202ENST00000593706 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 PCDHA2Q9Y5H9 948 aa16.8■□□□□ 0.28
PNKP-202ENST00000593706 TECTAO75443 2155 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 DDX39AO00148 427 aaKnown RBP16.79■□□□□ 0.28
PNKP-202ENST00000593706 BACH1O14867 736 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 LINC01565O15544 149 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 MBTPS2O43462 519 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 FOSP01100 380 aaPredicted RBP16.79■□□□□ 0.28
PNKP-202ENST00000593706 GTF2F1P35269 517 aaKnown RBP eCLIP16.79■□□□□ 0.287e-8■■■□□ 17.9
PNKP-202ENST00000593706 IRS1P35568 1242 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 ZNF76P36508 570 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 KRT76Q01546 638 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 EXOSC10Q01780 885 aaKnown RBP16.79■□□□□ 0.28
PNKP-202ENST00000593706 SMAD4Q13485 552 aaKnown RBP16.79■□□□□ 0.28
PNKP-202ENST00000593706 RTN1Q16799 776 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 ADCK5Q3MIX3 580 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 CEP55Q53EZ4 464 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 PLPPR4Q7Z2D5 763 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
PNKP-202ENST00000593706 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 GINS2Q9Y248 185 aa16.79■□□□□ 0.28
PNKP-202ENST00000593706 SMIM35A0A1B0GVV1 85 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 C19orf67A6NJJ6 358 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 ZBTB43O43298 467 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 ITGB1P05556 798 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 ARP10275 920 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 SLC26A2P50443 739 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
PNKP-202ENST00000593706 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
PNKP-202ENST00000593706 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 NAALADL2Q58DX5 795 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 FAM160B1Q5W0V3 765 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 MTHFD1LQ6UB35 978 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
PNKP-202ENST00000593706 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
PNKP-202ENST00000593706 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
PNKP-202ENST00000593706 KDM3AQ9Y4C1 1321 aa16.77■□□□□ 0.28
PNKP-202ENST00000593706 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
PNKP-202ENST00000593706 SPOUT1Q5T280 376 aaKnown RBP16.77■□□□□ 0.28
PNKP-202ENST00000593706 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
PNKP-202ENST00000593706 NME8Q8N427 588 aa16.77■□□□□ 0.28
PNKP-202ENST00000593706 TCEANC2Q96MN5 208 aa16.77■□□□□ 0.28
PNKP-202ENST00000593706 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
PNKP-202ENST00000593706 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
PNKP-202ENST00000593706 KMT2EQ8IZD2 1858 aa16.77■□□□□ 0.27
PNKP-202ENST00000593706 DENND3A2RUS2 1198 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 GOLGA8AA7E2F4 631 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 STXBP3O00186 592 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 RPS6KA5O75582 802 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 DNAJB1P25685 340 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 HSPA4P34932 840 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 SREBF1P36956 1147 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 GATMP50440 423 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 CAMK1Q14012 370 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms