RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 FAM86B1E9PN63 330 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 MEIS1O00470 390 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 DHX15O43143 795 aaKnown RBP12.19□□□□□ -0.46
USE1-203ENST00000593597 FAM86B2P0C5J1 330 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 ATP4AP20648 1035 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 SREBF1P36956 1147 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 NAPAP54920 295 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 ZP2Q05996 745 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 PPP1R18Q6NYC8 613 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
USE1-203ENST00000593597 TMEM40Q8WWA1 233 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 UIMC1Q96RL1 719 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 PADI3Q9ULW8 664 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 V9GY48 417 aaPredicted RBP12.19□□□□□ -0.46
USE1-203ENST00000593597 TECTAO75443 2155 aa12.19□□□□□ -0.46
USE1-203ENST00000593597 KDM3AQ9Y4C1 1321 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
USE1-203ENST00000593597 MAFGO15525 162 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 EDIL3O43854 480 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 MMP1P03956 469 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 IRS1P35568 1242 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 ADCY7P51828 1080 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
USE1-203ENST00000593597 CLUL1Q15846 466 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 RTN1Q16799 776 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 RSPH3Q86UC2 560 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 FAM122AQ96E09 287 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
USE1-203ENST00000593597 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
USE1-203ENST00000593597 CLDND1Q9NY35 253 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 NID2Q14112 1375 aa12.18□□□□□ -0.46
USE1-203ENST00000593597 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 ZBTB43O43298 467 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 ITGB1P05556 798 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 RB1P06400 928 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 STAT5BP51692 787 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 PKN1Q16512 942 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 PAN2Q504Q3 1202 aaKnown RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 ERVK-5Q9HDB9 667 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 NOC2LQ9Y3T9 749 aaKnown RBP12.17□□□□□ -0.46
USE1-203ENST00000593597 SQORQ9Y6N5 450 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
USE1-203ENST00000593597 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 GOLGA8AA7E2F4 631 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 MBTPS2O43462 519 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 GLP2RO95838 553 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 KLRC1P26715 233 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
USE1-203ENST00000593597 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 JAKMIP3Q5VZ66 844 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
USE1-203ENST00000593597 KIAA0319LQ8IZA0 1049 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 KCNB2Q92953 911 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 AZI2Q9H6S1 392 aa12.16□□□□□ -0.46
USE1-203ENST00000593597 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 C22orf31O95567 290 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 FOSP01100 380 aaPredicted RBP12.15□□□□□ -0.46
USE1-203ENST00000593597 SCG2P13521 617 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 KRT76Q01546 638 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 APOBRQ0VD83 1088 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 PAK2Q13177 524 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 ADAM15Q13444 863 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
USE1-203ENST00000593597 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
USE1-203ENST00000593597 PUS10Q3MIT2 529 aaKnown RBP12.15□□□□□ -0.46
USE1-203ENST00000593597 IER5Q5VY09 327 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 ZNF713Q8N859 430 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms