RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 EME2A4GXA9 379 aaPredicted RBP15.51■□□□□ 0.07
CIRBP-242ENST00000593093 SFI1A8K8P3 1242 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 ANP32DO95626 131 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 HIBADHP31937 336 aaKnown RBP15.51■□□□□ 0.07
CIRBP-242ENST00000593093 ZNF571Q7Z3V5 609 aaPredicted RBP15.51■□□□□ 0.07
CIRBP-242ENST00000593093 KLHL29Q96CT2 875 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 AK8Q96MA6 479 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.074e-8■■□□□ 13.3
CIRBP-242ENST00000593093 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 OSGEPQ9NPF4 335 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 BLOC1S4Q9NUP1 217 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 ATP6V1G2O95670 118 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 PPP1R2P41236 205 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 ELF3P78545 371 aaPredicted RBP15.51■□□□□ 0.07
CIRBP-242ENST00000593093 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
CIRBP-242ENST00000593093 ANKIB1Q9P2G1 1089 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 TBK1Q9UHD2 729 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 MAD2L2Q9UI95 211 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 AMFRQ9UKV5 643 aa15.51■□□□□ 0.07
CIRBP-242ENST00000593093 LRRC63Q05C16 580 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 EXOC3L4Q17RC7 722 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 AADACL2Q6P093 401 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 ZNF384Q8TF68 577 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 CUL5Q93034 780 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 NSUN4Q96CB9 384 aaKnown RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 ABCF3Q9NUQ8 709 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 DAAM1Q9Y4D1 1078 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 FLOT1O75955 427 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 YTHDF3Q7Z739 585 aaKnown RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 ZMYND12Q9H0C1 365 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 NUCKS1Q9H1E3 243 aaKnown RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 ARMCX3Q9UH62 379 aaPredicted RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 PJA2O43164 708 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 FLT1P17948 1338 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 SLC16A2P36021 539 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 KCNJ2P63252 427 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 PICALMQ13492 652 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 SLC29A2Q14542 456 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 SLC35G1Q2M3R5 365 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 HOOK3Q86VS8 718 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 GLYCTKQ8IVS8 523 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 SH3RF3Q8TEJ3 882 aaPredicted RBP15.5■□□□□ 0.07
CIRBP-242ENST00000593093 HDAC9Q9UKV0 1011 aa15.5■□□□□ 0.07
CIRBP-242ENST00000593093 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 A8MUI8 341 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 LRRN2O75325 713 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 ACSL3O95573 720 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 STAT3P40763 770 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 IRX1P78414 480 aaPredicted RBP15.49■□□□□ 0.07
CIRBP-242ENST00000593093 CYP4A11Q02928 519 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.073e-9■□□□□ 9.7
CIRBP-242ENST00000593093 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
CIRBP-242ENST00000593093 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 NUGGCQ68CJ6 796 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 CCDC65Q8IXS2 484 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 TATDN2Q93075 761 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 SLC12A6Q9UHW9 1150 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 NOL4O94818 638 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 HNRNPH3P31942 346 aaKnown RBP15.49■□□□□ 0.07
CIRBP-242ENST00000593093 DR1Q01658 176 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 C6orf89Q6UWU4 347 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 LRRC55Q6ZSA7 311 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 EPS8L3Q8TE67 593 aaKnown RBP15.49■□□□□ 0.07
CIRBP-242ENST00000593093 PARD3BQ8TEW8 1205 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 ADAM33Q9BZ11 813 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 MTFR1LQ9H019 292 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 PCDHA12Q9UN75 941 aa15.49■□□□□ 0.07
CIRBP-242ENST00000593093 POTEB3A0JP26 581 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 POTECB2RU33 542 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 KIF3CO14782 793 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
CIRBP-242ENST00000593093 USP11P51784 963 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 POTEBQ6S5H4 581 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 SLC17A8Q8NDX2 589 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 ARMC2Q8NEN0 867 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
CIRBP-242ENST00000593093 RAD54LQ92698 747 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 EYA3Q99504 573 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 TRIM33Q9UPN9 1127 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 UBOX5O94941 541 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 TMC3Q7Z5M5 1100 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 SPICE1Q8N0Z3 855 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 TBC1D22AQ8WUA7 517 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 LMBR1Q8WVP7 490 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 RUBCNQ92622 972 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 IQCDQ96DY2 449 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 PBKQ96KB5 322 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 FGFR1OP2Q9NVK5 253 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 MYH2Q9UKX2 1941 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 F8VZ95 297 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 H0Y3Z8 333 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 DRD4P21917 467 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 TRIP13Q15645 432 aaPredicted RBP15.48■□□□□ 0.07
CIRBP-242ENST00000593093 PTF1AQ7RTS3 328 aa15.48■□□□□ 0.07
CIRBP-242ENST00000593093 FBXO25Q8TCJ0 367 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms