RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 C11orf84Q9BUA3 381 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 FAM49AQ9H0Q0 323 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SH3GLB2Q9NR46 395 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CEP131Q9UPN4 1083 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TELO2Q9Y4R8 837 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TRPV2Q9Y5S1 764 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 H3BNC9 293 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 NCK2O43639 380 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 STAG3L1P0CL83 205 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ITGB3BPQ13352 177 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZNF746Q6NUN9 644 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PDXDC2PQ6P474 469 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SKAP1Q86WV1 359 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TMEM192Q8IY95 271 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ATP8B4Q8TF62 1192 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 C17orf80Q9BSJ5 609 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZNF302Q9NR11 478 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TMEM260Q9NX78 707 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CYP46A1Q9Y6A2 500 aa22.4■■□□□ 1.18
TNFRSF11A-204ENST00000592013 COL4A4P53420 1690 aaPredicted RBP22.39■■□□□ 1.18
TNFRSF11A-204ENST00000592013 KDM3AQ9Y4C1 1321 aa22.39■■□□□ 1.18
TNFRSF11A-204ENST00000592013 IGKV6D-21A0A0A0MT36 114 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CPLX1O14810 134 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 EIF5BO60841 1220 aaKnown RBP22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 IFNAR1P17181 557 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PAK2Q13177 524 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PUS10Q3MIT2 529 aaKnown RBP22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CKAP2LQ8IYA6 745 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PCYT2Q99447 389 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CELF4Q9BZC1 486 aaKnown RBP22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 LMAN2LQ9H0V9 348 aa22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PRRC2BQ5JSZ5 2229 aaKnown RBP22.39■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PSAPP07602 524 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 EVCP57679 992 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 TFF2Q03403 129 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 GPM6BQ13491 265 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 KRT40Q6A162 431 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 ABHD15Q6UXT9 468 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 RUFY3Q7L099 469 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 FAM167AQ96KS9 214 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 FAM50BQ9Y247 325 aa22.38■■□□□ 1.17
TNFRSF11A-204ENST00000592013 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 ADGRA3Q8IWK6 1321 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 IGSF9BQ9UPX0 1349 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 FAM86B1E9PN63 330 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 DDX39AO00148 427 aaKnown RBP22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 ENPP3O14638 875 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 FAM86B2P0C5J1 330 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 USP11P51784 963 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 MTHFD1LQ6UB35 978 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CRYGNQ8WXF5 182 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 BBXQ8WY36 941 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PLVAPQ9BX97 442 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PCDHA10Q9Y5I2 948 aa22.37■■□□□ 1.17
TNFRSF11A-204ENST00000592013 IGLV3-22A0A075B6J6 115 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CPA1P15085 419 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 KLRC1P26715 233 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CTNNB1P35222 781 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 BTG3Q14201 252 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 GALNT17Q6IS24 598 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 NPAS4Q8IUM7 802 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PPP2R3CQ969Q6 453 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 C1QTNF1Q9BXJ1 281 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 TM6SF1Q9BZW5 370 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 LRFN2Q9ULH4 789 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SAMM50Q9Y512 469 aa22.36■■□□□ 1.17
TNFRSF11A-204ENST00000592013 WDR64B1ANS9 1081 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 C5orf67F2Z3F1 127 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 MAGEB2O15479 319 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 TMOD1P28289 359 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PDIA3P30101 505 aaKnown RBP22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CIITAP33076 1130 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 KCNQ1P51787 676 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 NLRP5P59047 1200 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SSRP1Q08945 709 aaKnown RBP22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PKN1Q16512 942 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PRR16Q569H4 304 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 NAALADL2Q58DX5 795 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SWSAP1Q6NVH7 229 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SPRED2Q7Z698 418 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 BANK1Q8NDB2 785 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PHKBQ93100 1093 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 ZNF274Q96GC6 653 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 NSUN3Q9H649 340 aaKnown RBP22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 UBE2ZQ9H832 354 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 ZSWIM6Q9HCJ5 1215 aa22.35■■□□□ 1.17
TNFRSF11A-204ENST00000592013 GPR182O15218 404 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CDKL5O76039 1030 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CCNE2O96020 404 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CD52P31358 61 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 SFNP31947 248 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 BMPR1AP36894 532 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 CMTR2Q8IYT2 770 aaKnown RBP22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 RIT2Q99578 217 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 C1orf112Q9NSG2 853 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 PADI3Q9ULW8 664 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 MAFBQ9Y5Q3 323 aaPredicted RBP22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 RALGAPA2Q2PPJ7 1873 aa22.34■■□□□ 1.17
TNFRSF11A-204ENST00000592013 DGKIO75912 1065 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms