RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
TPM4-212ENST00000590180 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
TPM4-212ENST00000590180 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
TPM4-212ENST00000590180 WDR64B1ANS9 1081 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 EFCAB14O75071 495 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 CHRNA1P02708 482 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 ATP4AP20648 1035 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 KLRC1P26715 233 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 WDR5P61964 334 aaKnown RBP13.65□□□□□ -0.22
TPM4-212ENST00000590180 ZNF484Q5JVG2 852 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 FAM26DQ5JW98 314 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 MTHFD1LQ6UB35 978 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 HERC6Q8IVU3 1022 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 MYLIPQ8WY64 445 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 KIF2CQ99661 725 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 OSBPL7Q9BZF2 842 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 NRBP2Q9NSY0 501 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
TPM4-212ENST00000590180 M0QZ92 97 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
TPM4-212ENST00000590180 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
TPM4-212ENST00000590180 JAK3P52333 1124 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 DEFB103AP81534 67 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 PLEKHG4Q58EX7 1191 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 IER5Q5VY09 327 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 KRT40Q6A162 431 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
TPM4-212ENST00000590180 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
TPM4-212ENST00000590180 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
TPM4-212ENST00000590180 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 MAFBQ9Y5Q3 323 aaPredicted RBP13.64□□□□□ -0.23
TPM4-212ENST00000590180 CDY2AQ9Y6F7 541 aa13.64□□□□□ -0.23
TPM4-212ENST00000590180 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 TLL1O43897 1013 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 PSMD10O75832 226 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 AMHP03971 560 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 RPLP2P05387 115 aaKnown RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 GHRP10912 638 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 FOSL2P15408 326 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 SFNP31947 248 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 GUCY1B3Q02153 619 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 NR5A1Q13285 461 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 RABEP1Q15276 862 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 SAFBQ15424 915 aaKnown RBP eCLIP13.63□□□□□ -0.23
TPM4-212ENST00000590180 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 NME8Q8N427 588 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 MBOAT7Q96N66 472 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 LLPHQ9BRT6 129 aaKnown RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
TPM4-212ENST00000590180 SH2B1Q9NRF2 756 aaPredicted RBP13.63□□□□□ -0.23
TPM4-212ENST00000590180 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 SLC37A4O43826 429 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
TPM4-212ENST00000590180 MMP1P03956 469 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 CA3P07451 260 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
TPM4-212ENST00000590180 PPP4R3AQ6IN85 833 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
TPM4-212ENST00000590180 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 FAM167AQ96KS9 214 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
TPM4-212ENST00000590180 IFIH1Q9BYX4 1025 aaKnown RBP13.62□□□□□ -0.23
TPM4-212ENST00000590180 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 GINS2Q9Y248 185 aa13.62□□□□□ -0.23
TPM4-212ENST00000590180 COL1A2P08123 1366 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 ST18O60284 1047 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 UPP2O95045 317 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 ATP2B1P20020 1258 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 IGFBP4P22692 258 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 MGAT3Q09327 533 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 LPIN1Q14693 890 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 RDM1Q8NG50 284 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 APBB2Q92870 758 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 RAD9AQ99638 391 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
TPM4-212ENST00000590180 CEP131Q9UPN4 1083 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
TPM4-212ENST00000590180 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 MAGEB2O15479 319 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 ZNF862O60290 1169 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 GJB5O95377 273 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms