RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PANK2Q9BZ23 570 aa16.99■□□□□ 0.31
ATG4D-211ENST00000589753 TUT1Q9H6E5 874 aaKnown RBP16.99■□□□□ 0.31
ATG4D-211ENST00000589753 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
ATG4D-211ENST00000589753 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
ATG4D-211ENST00000589753 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
ATG4D-211ENST00000589753 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 DNM1LO00429 736 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 OATP04181 439 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 ATP4AP20648 1035 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 MARK3P27448 753 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 MCM4P33991 863 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 ACLYP53396 1101 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 COL13A1Q5TAT6 717 aaPredicted RBP16.98■□□□□ 0.31
ATG4D-211ENST00000589753 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 CXCL17Q6UXB2 119 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 TRMT1LQ7Z2T5 733 aaKnown RBP16.98■□□□□ 0.31
ATG4D-211ENST00000589753 KCTD17Q8N5Z5 321 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 PDILTQ8N807 584 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 KAT2BQ92831 832 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 FAM167AQ96KS9 214 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 NACC1Q96RE7 527 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 GOLPH3LQ9H4A5 285 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
ATG4D-211ENST00000589753 A0A087X0B3 334 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 CABYRO75952 493 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 CAPN2P17655 700 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 PLCG1P19174 1290 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
ATG4D-211ENST00000589753 PSEN2P49810 448 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 NDUFA8P51970 172 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 MFSD10Q14728 455 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 PLCB4Q15147 1175 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 BBXQ8WY36 941 aaPredicted RBP16.97■□□□□ 0.31
ATG4D-211ENST00000589753 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
ATG4D-211ENST00000589753 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 NRBP2Q9NSY0 501 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
ATG4D-211ENST00000589753 WDR81Q562E7 1941 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 A0A087WWV3 80 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 E9PMD0 336 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 HAS3O00219 553 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 POLR2DO15514 142 aaKnown RBP16.96■□□□□ 0.31
ATG4D-211ENST00000589753 STBD1O95210 358 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 XRCC6P12956 609 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG4D-211ENST00000589753 STAT6P42226 847 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 SYKP43405 635 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 CHMP4BP1P59074 171 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 PSMC6P62333 389 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 IQUBQ8NA54 791 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 PIGOQ8TEQ8 1089 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 DHX58Q96C10 678 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 ANKEF1Q9NU02 776 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 STK17AQ9UEE5 414 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 SEPT9Q9UHD8 586 aaPredicted RBP16.96■□□□□ 0.31
ATG4D-211ENST00000589753 TRPC6Q9Y210 931 aa16.96■□□□□ 0.31
ATG4D-211ENST00000589753 MYH9P35579 1960 aaKnown RBP16.95■□□□□ 0.3
ATG4D-211ENST00000589753 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
ATG4D-211ENST00000589753 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 ZBTB39O15060 712 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 HBP1O60381 514 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 E2F4Q16254 413 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 ANO5Q75V66 913 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 ANKLE1Q8NAG6 615 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
ATG4D-211ENST00000589753 NIFKQ9BYG3 293 aaKnown RBP16.95■□□□□ 0.3
ATG4D-211ENST00000589753 DBR1Q9UK59 544 aaKnown RBP16.95■□□□□ 0.3
ATG4D-211ENST00000589753 TMEM150BA6NC51 233 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 EYA4O95677 639 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 LIG1P18858 919 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 NAALADL2Q58DX5 795 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 XKR9Q5GH70 373 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 PLA2G4FQ68DD2 849 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 FMR1NBQ8N0W7 255 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-211ENST00000589753 ENGASEQ8NFI3 743 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 LRRC15Q8TF66 581 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
ATG4D-211ENST00000589753 RAD54LQ92698 747 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 CCDC43Q96MW1 224 aaKnown RBP16.94■□□□□ 0.3
ATG4D-211ENST00000589753 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 CUEDC2Q9H467 287 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
ATG4D-211ENST00000589753 ZNF202O95125 648 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 PLA2G4BP0C869 781 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 SMIM10L2AP0DMW4 78 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 SMIM10L2BP0DMW5 78 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 INSRRP14616 1297 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 PTMSP20962 102 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 RARRES1P49788 294 aa16.93■□□□□ 0.3
ATG4D-211ENST00000589753 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms