RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TC2NQ8N9U0 490 aa15.71■□□□□ 0.1
SMARCA4-214ENST00000589677 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 GGPS1O95749 300 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CDC25AP30304 524 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 MMGT1Q8N4V1 131 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CATSPER1Q8NEC5 780 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 TTC1Q99614 292 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 ZSWIM5Q9P217 1185 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 LRRN2O75325 713 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 SHC4Q6S5L8 630 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 hCG_2014768A0A024R1R8 64 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 KCNA3P22001 575 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 NR1I3Q14994 352 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 FAM102BQ5T8I3 360 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 KDM7AQ6ZMT4 941 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 ZBTB38Q8NAP3 1195 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 TTC17Q96AE7 1141 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CCDC124Q96CT7 223 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 PRMT1Q99873 361 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 SATB2Q9UPW6 733 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 TRIM49BA6NDI0 452 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CHN1P15882 459 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 LIG4P49917 911 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 KPNA2P52292 529 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 BBS9Q3SYG4 887 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 STAG2Q8N3U4 1231 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 HIPK4Q8NE63 616 aa15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-214ENST00000589677 CCDC22O60826 627 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 LTKP29376 864 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 KRT39Q6A163 491 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 PCGF5Q86SE9 256 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 MCF2L2Q86YR7 1114 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 RASGRP4Q8TDF6 673 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 MXD3Q9BW11 206 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 UBE2TQ9NPD8 197 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 TMOD4Q9NZQ9 345 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 EFCAB6Q5THR3 1501 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 TCP11X1B4DZS4 312 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 ARL4CP56559 192 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 BASP1P80723 227 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 DACT3Q96B18 629 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 HDAC11Q96DB2 347 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 PHF20L1A8MW92 1017 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 GNGT2O14610 69 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 FOXP2O15409 715 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 KRT10P13645 584 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 ADORA1P30542 326 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 LRRC14Q15048 493 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 VCPKMTQ9H867 229 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 SENP1Q9P0U3 644 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 TUBE1Q9UJT0 475 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 PDE8BO95263 885 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 GOLGA8HP0CJ92 632 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 DLATP10515 647 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 DEPTORQ8TB45 409 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 TBCKQ8TEA7 893 aa15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 PUS7LQ9H0K6 701 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-214ENST00000589677 MED21Q13503 144 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 RAPH1Q70E73 1250 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 TMEM206Q9H813 350 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 DNAJC17Q9NVM6 304 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 NUB1Q9Y5A7 615 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 RCAN1P53805 252 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 ZIM3Q96PE6 472 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 ZC4H2Q9NQZ6 224 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 GINM1Q9NU53 330 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 CYLC2Q14093 348 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 METTL16Q86W50 562 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 REXO1L1PQ8IX06 675 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 PDP2Q9P2J9 529 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 NT5C2P49902 561 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 MLXIPLQ9NP71 852 aa15.68■□□□□ 0.1
SMARCA4-214ENST00000589677 CFAP69A5D8W1 941 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 RARS2Q5T160 578 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 DAB2IPQ5VWQ8 1189 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 LONP2Q86WA8 852 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 SMYD3Q9H7B4 428 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 DCTN4Q9UJW0 460 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 HECW2Q9P2P5 1572 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 WDR46O15213 610 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 ZNF185O15231 689 aa15.67■□□□□ 0.1
SMARCA4-214ENST00000589677 PGM1P36871 562 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms