RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 PPP1R16BQ96T49 567 aa17.32■□□□□ 0.36
PRKCSH-204ENST00000587290 NSUN3Q9H649 340 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-204ENST00000587290 C11orf16Q9NQ32 467 aa17.32■□□□□ 0.36
PRKCSH-204ENST00000587290 GINS2Q9Y248 185 aa17.32■□□□□ 0.36
PRKCSH-204ENST00000587290 FNDC1Q4ZHG4 1894 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-204ENST00000587290 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 GTF2F1P35269 517 aaKnown RBP eCLIP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■□□□□ 10.9
PRKCSH-204ENST00000587290 FGD1P98174 961 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 BTG3Q14201 252 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 CLUL1Q15846 466 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 Q6ZUG5 572 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 TRMT1LQ7Z2T5 733 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 ZNF689Q96CS4 500 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 LRFN3Q9BTN0 628 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 C1QTNF1Q9BXJ1 281 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 CLDND1Q9NY35 253 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 PADI3Q9ULW8 664 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 PCDHA2Q9Y5H9 948 aa17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 MRPL42Q9Y6G3 142 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-204ENST00000587290 IGSF9BQ9UPX0 1349 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 IGLV3-22A0A075B6J6 115 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 BACH1O14867 736 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 DGKIO75912 1065 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 BMPR1AP36894 532 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 IER5Q5VY09 327 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 PLPPR4Q7Z2D5 763 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 NEK9Q8TD19 979 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 BRF1Q92994 677 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 PHKBQ93100 1093 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 TMX1Q9H3N1 280 aa17.3■□□□□ 0.36
PRKCSH-204ENST00000587290 IGKV6D-21A0A0A0MT36 114 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 M0QZ92 97 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 ATG7O95352 703 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 SCG2P13521 617 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 KLRC1P26715 233 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 SSTR3P32745 418 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 DLX2Q07687 328 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 PAK2Q13177 524 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 KRT32Q14532 448 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 PKN1Q16512 942 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 ABHD15Q6UXT9 468 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 TMEM40Q8WWA1 233 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 PABPC5Q96DU9 382 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
PRKCSH-204ENST00000587290 SMIM35A0A1B0GVV1 85 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 ZBTB42B2RXF5 422 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 LINC01565O15544 149 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 MGEA5O60502 916 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 ATP4AP20648 1035 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 DNAJB1P25685 340 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 LTBRP36941 435 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 KRT76Q01546 638 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 HYAL1Q12794 435 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 CAMK1Q14012 370 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 SWSAP1Q6NVH7 229 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 PDXDC2PQ6P474 469 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 GJD3Q8N144 294 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 CRIPAKQ8N1N5 446 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 ATP8B4Q8TF62 1192 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 CRYGNQ8WXF5 182 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 C11orf84Q9BUA3 381 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 ZNF302Q9NR11 478 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 HCSTQ9UBK5 93 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
PRKCSH-204ENST00000587290 IPO5O00410 1097 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 COL19A1Q14993 1142 aa17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 TMEM31Q5JXX7 168 aa17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 NPAS4Q8IUM7 802 aa17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 IGFLR1Q9H665 355 aa17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 NOC2LQ9Y3T9 749 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-204ENST00000587290 TBX10O75333 385 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 RB1P06400 928 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 IRS1P35568 1242 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 RCAN1P53805 252 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 FAM160B1Q5W0V3 765 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 NIPA1Q7RTP0 329 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
PRKCSH-204ENST00000587290 KIAA0319LQ8IZA0 1049 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms