RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 BHMT2Q9H2M3 363 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 AZI2Q9H6S1 392 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 MLXIPQ9HAP2 919 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 PANK4Q9NVE7 773 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 RBPJLQ9UBG7 517 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 ODF2LQ9ULJ1 636 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 PCDHA10Q9Y5I2 948 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 COL4A3BPQ9Y5P4 624 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 UBE4BO95155 1302 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SLC15A5A6NIM6 579 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 PGK2P07205 417 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 TPM1P09493 284 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 XRCC6P12956 609 aaKnown RBP eCLIP6.87□□□□□ -1.31
LIG3-206ENST00000586058 ADORA2AP29274 412 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 ICAM3P32942 547 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 ABCD1P33897 745 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SARSP49591 514 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 MDM2Q00987 491 aaPredicted RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 CNTN2Q02246 1040 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SP4Q02446 784 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 COASYQ13057 564 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 NAALADL2Q58DX5 795 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 FAM26FQ5R3K3 315 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 GPR142Q7Z601 462 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 EXOC8Q8IYI6 725 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 FAM43AQ8N2R8 423 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 FAM133AQ8N9E0 248 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SYT2Q8N9I0 419 aaPredicted RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 NOC3LQ8WTT2 800 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 FAM167AQ96KS9 214 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 PNMA5Q96PV4 448 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SENP7Q9BQF6 1050 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 EFCC1Q9HA90 598 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 VTA1Q9NP79 307 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 LARSQ9P2J5 1176 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 SEL1LQ9UBV2 794 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SEPT9Q9UHD8 586 aaPredicted RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 KCNG1Q9UIX4 513 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 RWDD2AQ9UIY3 292 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 DBR1Q9UK59 544 aaKnown RBP6.87□□□□□ -1.31
LIG3-206ENST00000586058 DOCK3Q8IZD9 2030 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 EVPLQ92817 2033 aa6.87□□□□□ -1.31
LIG3-206ENST00000586058 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 MYMKA6NI61 221 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 SPATA31C2B4DYI2 1134 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 H0YCG3 227 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 TLR2O60603 784 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 ADCY5O95622 1261 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 YY1P25490 414 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 YWHABP31946 246 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 RGS2P41220 211 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 LRRC63Q05C16 580 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 ITGB3BPQ13352 177 aaPredicted RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 ALCAMQ13740 583 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 HSP90AA2PQ14568 343 aaPredicted RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 BRDTQ58F21 947 aaPredicted RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 HERC4Q5GLZ8 1057 aaPredicted RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 SARM1Q6SZW1 724 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 ARMCX2Q7L311 632 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 DHX40Q8IX18 779 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 C4orf19Q8IY42 314 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 MYOCDQ8IZQ8 938 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 MCPH1Q8NEM0 835 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 NELFBQ8WX92 580 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 NUDT12Q9BQG2 462 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 PORCNQ9H237 461 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 MRPL44Q9H9J2 332 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 ZNF302Q9NR11 478 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 BLOC1S4Q9NUP1 217 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 RGL1Q9NZL6 768 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 CPA4Q9UI42 421 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 ZNF215Q9UL58 517 aaPredicted RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 DIS3Q9Y2L1 958 aaKnown RBP6.86□□□□□ -1.31
LIG3-206ENST00000586058 NFE2L3Q9Y4A8 694 aa6.86□□□□□ -1.31
LIG3-206ENST00000586058 IGSF9BQ9UPX0 1349 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 DNAJC25-GNG10A0A024R161 153 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 K7ENM7 598 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 EML1O00423 815 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PES1O00541 588 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
LIG3-206ENST00000586058 CALUO43852 315 aaPredicted RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 EDIL3O43854 480 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 USO1O60763 962 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 PPP1R37O75864 691 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 LYPLA2O95372 231 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 GGPS1O95749 300 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 GH1P01241 217 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SUPT20HL2P0C7V6 817 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms