RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 CGNQ9P2M7 1197 aaKnown RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 VWA5AO00534 786 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 ACOT2P49753 483 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 RINT1Q6NUQ1 792 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 HS2ST1Q7LGA3 356 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
RFFL-212ENST00000584655 NLRP4Q96MN2 994 aa11.31□□□□□ -0.6
RFFL-212ENST00000584655 MYH6P13533 1939 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 NOP56O00567 594 aaKnown RBP11.3□□□□□ -0.6
RFFL-212ENST00000584655 FANCGO15287 622 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 BIRC3Q13489 604 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 PPM1KQ8N3J5 372 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 PACSIN1Q9BY11 444 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 TRIM31Q9BZY9 425 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 MYO1AQ9UBC5 1043 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 FEM1BQ9UK73 627 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 AKAP3O75969 853 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 GIT2Q14161 759 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 CNGA4Q8IV77 575 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 TAB3Q8N5C8 712 aaPredicted RBP11.3□□□□□ -0.6
RFFL-212ENST00000584655 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
RFFL-212ENST00000584655 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.6
RFFL-212ENST00000584655 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 LENG9Q96B70 501 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
RFFL-212ENST00000584655 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
RFFL-212ENST00000584655 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 XRCC5P13010 732 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 PTGER2P43116 358 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 FKBP3Q00688 224 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 JAKMIP2Q96AA8 810 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 IFIH1Q9BYX4 1025 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 UNC80Q8N2C7 3258 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 LGALS16A8MUM7 142 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 PHF20L1A8MW92 1017 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 CSPG5O95196 566 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 SLU7O95391 586 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 KRT5P13647 590 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 SREBF1P36956 1147 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 MAGEA1P43355 309 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 DLG4P78352 724 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 KLHL30Q0D2K2 578 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 ORC1Q13415 861 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 DNAJC21Q5F1R6 531 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 KAT5Q92993 513 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 MKL1Q969V6 931 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
RFFL-212ENST00000584655 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 IMPACTQ9P2X3 320 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
RFFL-212ENST00000584655 LAMB2P55268 1798 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 LAD1O00515 517 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 NDUFA10O95299 355 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 NR3C1P04150 777 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 MYH1P12882 1939 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
RFFL-212ENST00000584655 USP11P51784 963 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 CDKAL1Q5VV42 579 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 PPP4R3AQ6IN85 833 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 SCARA5Q6ZMJ2 495 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 FAM186BQ8IYM0 893 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 FHOD1Q9Y613 1164 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 NHSQ6T4R5 1651 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms