RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	PBXIP1	Q96AQ6	731 aa		10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	SNX27	Q96L92	541 aa		10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	RTEL1	Q9NZ71	1219 aa		10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	TELO2	Q9Y4R8	837 aa		10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	FRYL	O94915	3013 aa		10.07	□□□□□ -0.8
NUP85-223	ENST00000583877	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	LOC730098	B7Z3J9	87 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	ST18	O60284	1047 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	GABBR2	O75899	941 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	RPLP2	P05387	115 aa	Known RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	ITGB1	P05556	798 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	DNAJB1	P25685	340 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	TCF7	P36402	384 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	ZXDA	P98168	799 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	SP4	Q02446	784 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	PPFIA1	Q13136	1202 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	CBX2	Q14781	532 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	PLEKHM2	Q8IWE5	1019 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	SUGP1	Q8IWZ8	645 aa	Known RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	CRIPAK	Q8N1N5	446 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	SPPL3	Q8TCT6	385 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	PHOX2B	Q99453	314 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	FTHL17	Q9BXU8	183 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	ERAP1	Q9NZ08	941 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	CLEC1B	Q9P126	229 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	TUBE1	Q9UJT0	475 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	CDY2A	Q9Y6F7	541 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	MRPL42	Q9Y6G3	142 aa	Known RBP	10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	SQOR	Q9Y6N5	450 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	ZNF292	O60281	2723 aa		10.06	□□□□□ -0.8
NUP85-223	ENST00000583877	PIK3CD	O00329	1044 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	CSPG5	O95196	566 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	RRP1	P56182	461 aa	Known RBP	10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	MRPS6	P82932	125 aa	Known RBP	10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	TROAP	Q12815	778 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	TRDN	Q13061	729 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	GRIK4	Q16099	956 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	MARCH8	Q5T0T0	291 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	ADGRD2	Q7Z7M1	963 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	NLRX1	Q86UT6	975 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	NPAS4	Q8IUM7	802 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	SMC5	Q8IY18	1101 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	FBXL6	Q8N531	539 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	KLHL23	Q8NBE8	558 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	POF1B	Q8WVV4	589 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	DNAJB3	Q8WWF6	145 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	LINC01599	Q8WXQ3	324 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	GPRASP2	Q96D09	838 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	CDHR1	Q96JP9	859 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	AGO3	Q9H9G7	860 aa	Known RBP	10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	DMXL1	Q9Y485	3027 aa		10.05	□□□□□ -0.8
NUP85-223	ENST00000583877	GSTTP1	A0A1W2PQM5	241 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	ERICH2	A1L162	156 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	RRN3P2	A6NIE6	340 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	MEIS2	O14770	477 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	IFIT3	O14879	490 aa	Known RBP	10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	GLP2R	O95838	553 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	STAG3L1	P0CL83	205 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	KCNA2	P16389	499 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	CD52	P31358	61 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	NRIP1	P48552	1158 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	TCF15	Q12870	199 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	IER5	Q5VY09	327 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	CHD1L	Q86WJ1	897 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	SMARCC2	Q8TAQ2	1214 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	SEPT1	Q8WYJ6	367 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	CUL5	Q93034	780 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	PHF7	Q9BWX1	381 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	SMARCAD1	Q9H4L7	1026 aa		10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	USP15	Q9Y4E8	981 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP85-223	ENST00000583877	FSD2	A1L4K1	749 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877		M0QZ92	97 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	ATP9A	O75110	1047 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	SEC24B	O95487	1268 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	ATF7	P17544	494 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	MARK3	P27448	753 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	SIGLEC14	Q08ET2	396 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	WTAP	Q15007	396 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	SART3	Q15020	963 aa	Known RBP	10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	PAN2	Q504Q3	1202 aa	Known RBP	10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	B4GALNT3	Q6L9W6	998 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	USP17L6P	Q6QN14	398 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	CATIP	Q7Z7H3	387 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	GLG1	Q92896	1179 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	MAP3K14	Q99558	947 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	SPZ1	Q9BXG8	430 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	IRF2BPL	Q9H1B7	796 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	SENP2	Q9HC62	589 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	PADI3	Q9ULW8	664 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	IGSF9B	Q9UPX0	1349 aa		10.03	□□□□□ -0.8
NUP85-223	ENST00000583877	DENND4A	Q7Z401	1863 aa		10.02	□□□□□ -0.8
NUP85-223	ENST00000583877	GVINP1	Q7Z2Y8	2422 aa		10.02	□□□□□ -0.81
NUP85-223	ENST00000583877	MAFG	O15525	162 aa		10.02	□□□□□ -0.81
NUP85-223	ENST00000583877	SCG2	P13521	617 aa		10.02	□□□□□ -0.81
NUP85-223	ENST00000583877	ITGB5	P18084	799 aa		10.02	□□□□□ -0.81
NUP85-223	ENST00000583877	SMARCA1	P28370	1054 aa		10.02	□□□□□ -0.81

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